| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2754 |
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| Symbol | glyS |
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| ID | 4310450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 3034105 |
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| End bp | 3036204 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638150593 |
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| Product | glycyl-tRNA synthetase subunit beta |
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| Protein accession | YP_774644 |
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| Protein GI | 115352805 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.200754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCATA ACCATCCCGC CCCCCTGCTC GTCGAATTGC TGACCGAAGA GCTGCCGCCG
AAGGCCCTCG CGCGCCTCGG CGACGCATTC GCCGAAGGTC TCGCGCAACG CCTCGCGGCG
CGCGACCTCG TCGAAGGCGA ACTCGTGTTC GAACGCTACG CCACGCCGCG CCGCCTCGCC
GTCGTCGTGC AGAACGTGCG CGCCGTCGCG CCTGAAAAGC AGGTCCGCGA AAAGGTCCTG
CCCGTCTCGG TCGCGCTCGA CGCCGAAGGC AAGCCGACGG CCCCGCTCGC GAAGAAGCTC
GCGGCGCTCG GTCACCCGCA CCTGTCGATC GCCGATCTCG AGCGCGCGCA GGACGGCAAG
GCCGAAGCGT TCTTCGTCAA TTACTCGGCA GCCGGCGCGA CGCTCGCCGA CGGCCTGCAG
GCCGCGCTCG ACGAAACCCT CGCGAAGCTG CCGATCCCGA AGTTCATGAC CTACCAGCGC
CCGGACGGCA CCGACGTGAA GTTCGTGCGC CCGGTGCACC GCCTGACCGT GCTGCACGAC
GATCGCGTCG TGCCCGTGAC CGCGTTCGGC ATCGACGCCG GCGACACCAC GCTCGGCCAC
CGCTTCCTGT CCGACGGCCT CGTCGCGATC CAGCATGCGC ACGCGTATGC CGACACGCTG
CGCGACAAGG GTCGCGTGAT CGCGCACTTC GCCGACCGCC GCGAAACGAT CCGCACGCAG
CTGAACGAAC ACGCGAACGG CGACACGGTC GTGATGCCCG AAGCGCTGCT CGACGAAGTG
ACGTCGCTGG TCGAATGGCC GGTCGTCTAT CCGTGCCGCT TCGAGGACGA ATTCCTGCAG
GTGCCGCAGG AATGCCTGAT CCTCACGATG CAGACGAACC AGAAGTACTT CGCGCTGACC
GACGTCGGCG GCAAGCTGCG CTCGCGCTTC CTGATCGTGT CGAACATCGA CACGAAGACG
CCGGGCGAGA TCATCGAAGG CAACGAGCGC GTCGTGCGCC CGCGCCTCGC CGACGCGAAG
TTCTTCTTCG AGCAGGACAA GAAGAAGCCG CTCGCCGACC GCGTGCCGCT GCTCGCGAAC
GTCGTCTATC ACAACAAGCT CGGTTCGGCG CTCGCGCGCG TCGAGCGCCT CGAGGCGCTG
GCCGGCGAGA TCGCGCCCGC GATCGGCGCC GACGCCGCGC ACGCGAAGCG CGCCGCGCGC
CTCGCGAAGG CCGACCTGCT GACCGACATG GTCGGCGAGT TCCCTGAACT GCAGGGCACG
ATGGGCACGT ACTACGCGCG TCACGACGGC GAGCCCGACG ACGTCGCGCT CGCATGCGCC
GAGCACTACC AGCCGCGCTT CTCCGGCGAC GCGCTGCCGA CCACGCCGGT GTCGACCGCC
GTCGCGCTGG CCGACAAGCT CGAGACGATC GTCGGCATCT GGGGCATCGG CCTCGCGCCG
ACGGGCGAAA AGGATCCGTT CGCGCTGCGC CGCCACGCGC TCGGCGTGCT GCGCCTGCTG
CTCGAGAAGC AGCTGCCGCT CGATCTCGTC GCGCTGCTGC GCACGGCCCA TGCACGCTTC
GAAGGCGTGC CGGGCGTCGC CGAATCGACC GACGCGATCT TCGCGTTCTT CATGGACCGC
CTGCGCGGCC TGCTGCGCGA ACGCGGCTAC TCGGCCGGCG AAGTCGACGC GGTGCTGAGC
CTGAACCCGA CGCGCGTCGA CGATCTCGTC GCGCGCCTCG ACGCGGTGCG CGAATTCACG
CTTCTCGCGG AAGCCGAGGC GCTCGCGGCC GCGAACAAGC GGATCTCGAA CATCCTGAAG
AAGTCGGAAG GCGGCGCGAA CGGCACGGTG CAGCCGACGC TGCTCGTCGA GGCCGCCGAA
AAGGCGCTGC ACGAACAGCT CGCGGCCGTG ACGCCGCACG TGCAGTCGCA GCTCGAGGCA
CGTGCGTACA CGGGCGCGCT GTCGGCGCTC GCCGCGCTGC GCGCACCGGT CGATACGTTC
TTCAACGACG TGATGGTCAA CGCCGAGGAT CCCGCGCTGC GCGCCAACCG TCTCGCGCTG
CTGTTCGCGC TGCATCAGCA GATGAACTGT GTCGCCGACA TCTCGAAGCT CGCCGCATAA
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| Protein sequence | MTHNHPAPLL VELLTEELPP KALARLGDAF AEGLAQRLAA RDLVEGELVF ERYATPRRLA
VVVQNVRAVA PEKQVREKVL PVSVALDAEG KPTAPLAKKL AALGHPHLSI ADLERAQDGK
AEAFFVNYSA AGATLADGLQ AALDETLAKL PIPKFMTYQR PDGTDVKFVR PVHRLTVLHD
DRVVPVTAFG IDAGDTTLGH RFLSDGLVAI QHAHAYADTL RDKGRVIAHF ADRRETIRTQ
LNEHANGDTV VMPEALLDEV TSLVEWPVVY PCRFEDEFLQ VPQECLILTM QTNQKYFALT
DVGGKLRSRF LIVSNIDTKT PGEIIEGNER VVRPRLADAK FFFEQDKKKP LADRVPLLAN
VVYHNKLGSA LARVERLEAL AGEIAPAIGA DAAHAKRAAR LAKADLLTDM VGEFPELQGT
MGTYYARHDG EPDDVALACA EHYQPRFSGD ALPTTPVSTA VALADKLETI VGIWGIGLAP
TGEKDPFALR RHALGVLRLL LEKQLPLDLV ALLRTAHARF EGVPGVAEST DAIFAFFMDR
LRGLLRERGY SAGEVDAVLS LNPTRVDDLV ARLDAVREFT LLAEAEALAA ANKRISNILK
KSEGGANGTV QPTLLVEAAE KALHEQLAAV TPHVQSQLEA RAYTGALSAL AALRAPVDTF
FNDVMVNAED PALRANRLAL LFALHQQMNC VADISKLAA
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