Gene Bamb_2743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2743 
Symbol 
ID4310439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand- 
Start bp3020475 
End bp3021158 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content73% 
IMG OID638150582 
ProductXRE family transcriptional regulator 
Protein accessionYP_774633 
Protein GI115352794 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCAT CCCTGGCGCT GGTGCGCGAC GTGTCTTCCT TCGAGTCCGG CGAGGCCGCC 
GGCGCGCGAG CGGCCGCGTC GCTCGACCTC CTCGAGCAGG TCGTCGGCGT GAACCTCGCG 
CGCTTGCGTG CCGAGCGGCA ACTGTCGCTC GATGCGCTCG CGCGTCTGTC CGGCGTATCG 
CGTGCGATGC TCGCGCAGAT CGAATCCGCA CGCAGCGTGC CGTCGATCAA GGTGCTCTGC 
AAGATCGCCG CGGCGCTGAA GGTGTCGGTC GCCGCGTTCC TGCGCCGCCA CGCGGTGAAC 
GGCTTCGAGC ACCTGGCGGC GGAGCGCGCG GCGCGCGTCG TCAGCTCGAG CGGCCGTTTC 
TCGGCGCGTG CGCTGTATCC GGAGGGCGAA CCGGCCGCGG CCGAATTCCA CGAGCTGCGG 
ATCGCGCCGC TGCACACGGA GCCCGGCACG CGCCGCGCGC CCGGCACGAC GGTCAACCTG 
GTCGTCAGCG AGGGCACGCT CGAAGTCAGC GTGCACGATC GCCGCCAGTT GCTCGCGACC 
GGCGACGCGA TCGTGTTCGA CGCCGACCAG CCGTACAGCC TGCGCAACCC GGGCGACAGC 
GAAGCGCGCG CGTTCCGCGT GACGGTGAGC CCCGAAGTGC CGCCGCGCTG GCTCGTGCCC 
GACGCCGCGC ACGCGGCAGG CTGA
 
Protein sequence
MSSSLALVRD VSSFESGEAA GARAAASLDL LEQVVGVNLA RLRAERQLSL DALARLSGVS 
RAMLAQIESA RSVPSIKVLC KIAAALKVSV AAFLRRHAVN GFEHLAAERA ARVVSSSGRF 
SARALYPEGE PAAAEFHELR IAPLHTEPGT RRAPGTTVNL VVSEGTLEVS VHDRRQLLAT 
GDAIVFDADQ PYSLRNPGDS EARAFRVTVS PEVPPRWLVP DAAHAAG