Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2700 |
Symbol | |
ID | 4310046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 2974022 |
End bp | 2974870 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638150538 |
Product | two component transcriptional regulator |
Protein accession | YP_774590 |
Protein GI | 115352751 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.469389 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAGACAC TGTATAAAAA AACAGTGTTT TGTGCAAGCC CGCAATGCAG AGCGTTGTAC ACGAATAACT TCGGAGACAG CCGCGCCGGC GCGAATGCCC GCCGGCCATC GGTCAGCACC ATGCGAATTC TCATCGCCGA AGATGACAGC ATACTCGCGG ACGGCCTCAC CCGGTCACTC CGCCAATCGG GCTATGCGGT CGACCACGTG AAGAGCGGCG TCGACGCCGA TACGGCGCTG TCGATGCAGA CATTCGACCT GCTGATCCTC GATCTCGGGC TGCCGAAAAT GTCCGGGCTC GACGTGCTCA AGCGCCTGCG CGCCCGCAAT TCCAACCTCC CCGTGCTGAT CCTGACCGCC GCCGACAGCG TCGACGAACG CGTGAAGGGG CTCGACCTCG GCGCCGACGA TTACATGGCC AAGCCGTTCG CGCTCAACGA GCTGGAAGCG CGCGTGCGCG CGCTGACCCG GCGCGGCGCG GGCGGCGGCC CGACCGTCGT GCGCCACGGC TCGCTCGCGT TCGACCAGGT CGGCCGCATC GCATATGCGA ACGATCACGT GCTCGATCTC TCCGCGCGCG AGCTCGGCCT GCTCGAGGTG CTGCTGCAGC GGATCGGCCG GCTCGTGTCG AAGGAGCAGC TCGTCGATCA CCTGTGCGAA TGGGGCGAGG AAGTCAGCAA CAACGCGATC GAAGTCTACG TGCACCGGCT GCGCAAGAAG ATCGAACCGA GCGGCGTGCG GATCTCGACC GTGCGCGGCC TCGGCTATTG CCTCGAGAAG GTCGCGCCCG CCGCGCCGAC CGATACGGCA GCGCCCCAGC CCGTGGTGGC CGGCACGCCG CTGCGCTGA
|
Protein sequence | MQTLYKKTVF CASPQCRALY TNNFGDSRAG ANARRPSVST MRILIAEDDS ILADGLTRSL RQSGYAVDHV KSGVDADTAL SMQTFDLLIL DLGLPKMSGL DVLKRLRARN SNLPVLILTA ADSVDERVKG LDLGADDYMA KPFALNELEA RVRALTRRGA GGGPTVVRHG SLAFDQVGRI AYANDHVLDL SARELGLLEV LLQRIGRLVS KEQLVDHLCE WGEEVSNNAI EVYVHRLRKK IEPSGVRIST VRGLGYCLEK VAPAAPTDTA APQPVVAGTP LR
|
| |