| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2692 |
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| Symbol | |
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| ID | 4310038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 2965557 |
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| End bp | 2967335 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638150530 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_774582 |
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| Protein GI | 115352743 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.341855 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTCTA CTTTTTCCCG TTCGTTGCCG CTCGTTGCGC TGGCTGTCGC CCTGATCGTG
CCGTACGCGA TCACGAATCA CACGTATCCG ATCCCGACCT TCTATTCCGA GTTTGCCGCG
CTGGTGCTGT ATCTGCTGGT GGGGCTCTCC GTCGTCCTGC TCGCGCGCAC GGGCCGCCCG
GCCGAGCCGT TCGCGGCGCC GGCCGCGTTC GTCGCGCCGC TCGGGTTCGC GGCGGTGCTG
CTCGCGCAGG TCGCGCTGAT GCCGCTGAAA GTGCCGTCGA TGAACTGGCT GGCGCTCGGC
TATCTGGCCG CCGCGCTGGT CGCGATGCAG GCCGGCTACA CGCTCGCGCG CGAGGGGCTC
GCCGAAGCCA CCGCGCGAAT GATGGCCGGC GCGCTGCTCG TCGGCGGCGT GTTCGCGGTC
GCGAGCCAGG TCGTGCAGTT GTTCCATCTG GAAACCGCGG TGTCGCCGTT CGTCGTGGTC
TACAACATCG CGGTCGATCG CCGTCCCTAC GGCAACATGG CGCAGGCGAA CCACCTGGCG
ACCTACATCG CTTTTGCGCT CGCGGGCGCG TTGTATCTGG TGCAGACGCG CCGGCTCGCG
GTATGGGCCT GGTTCGCGCT GTCGATCGTG CTGTCGGTCG GTCTCGCGCT GACGGTGTCG
CGGGGCCCGT GGCTGCAGGT CGCGGTGATG GTCGTCGCGG GCTTCTGGAT GGCGTGGCTC
GAGTCGCGCC GTGCGCCGGC CAACCGCCGC GCATGGCTGA TACCGGCCGC GCTCGCGGTG
GCCTTCGTCG CGGTGAACGT CGCGGTGCGC TGGGCCAACG TGCATTTCCA CCTGGGGCTT
GCCGAGTCGG CCGCCGAGCG GATGCGCGAC GCGGGGCAGA TCGCGCCGCG GCTCGCGCTG
TGGAAGTATG GGCTCGCGAT GTTCCGCGAG CATCCGCTGC TTGGCGTCGG CTGGGGCGAA
TTCCCGTCGC ACCAGTTCGC GCTCGTGCGC ACGCTCGGCG GTGTCGAGAT CGCGAACAAC
TCGCACGACA TCTTCATCGA CCTGCTCGCG AAGTCCGGTC TGCTGGGTCT CGGCGTGCTC
GTCGTCGCGC TCGTGACGTG GTTCGTGCGC GCGGTGCGTG CGCCGCAGTC GAGCACGCGC
GTGTTCGGCC TCGCGCTGAT CGGCATCCTG CTGATGCATG CGCTCGTCGA ATATCCGCAG
CAGTACATGT TCTTCCTGCT GCCGGCGATG TTCGTGATCG GCCTGCTCGA CGTGAAGCCG
CTGCGCGTCC TGCCGGGCCG CGCGGCGTTC GGGCTGTTCG CGGTGCTGTC GGTCGGCGGC
GTGCTGGCGG TGGTACCCGT GCTGCGCGAC TACCAGCGCG CGGAAGTGCT GTATTACGGC
AGCGATCCGG CCGCGCAGTA CCGCGATGCG CCGTCGCAGC TGTTCGGCGC GTGGGGCGAT
TACGGGGTGG CCACGCTGCT GACGATTTCG CCGGAGAACC TGCCGCTCAA GCTCGCCGCG
CACGAGCGCG CGATCGCGCT GCTGCCGGGC GAGACGGTGC TGCGCCGCTA TGCGGCGCTG
CAGGCGCTGG CCGGCCGGGA CGCCGATGCG CTCGATACGG TCGCGCGCCT GCATGTGTTC
GCGAAGGAAT TGAAGGACTG GCCGCAGCAG TTGGCGTTGC TGTACAAGCT GTGCGACCAG
CAACCGGCGC TGAAGGCGTT CAAGGCGGCC GTCGTCGCGA AGTACGGGGA AGTGCCGGCC
GATGCGGACG AGGACGACTC CGACGACGAT TCCGAGTGA
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| Protein sequence | MPSTFSRSLP LVALAVALIV PYAITNHTYP IPTFYSEFAA LVLYLLVGLS VVLLARTGRP
AEPFAAPAAF VAPLGFAAVL LAQVALMPLK VPSMNWLALG YLAAALVAMQ AGYTLAREGL
AEATARMMAG ALLVGGVFAV ASQVVQLFHL ETAVSPFVVV YNIAVDRRPY GNMAQANHLA
TYIAFALAGA LYLVQTRRLA VWAWFALSIV LSVGLALTVS RGPWLQVAVM VVAGFWMAWL
ESRRAPANRR AWLIPAALAV AFVAVNVAVR WANVHFHLGL AESAAERMRD AGQIAPRLAL
WKYGLAMFRE HPLLGVGWGE FPSHQFALVR TLGGVEIANN SHDIFIDLLA KSGLLGLGVL
VVALVTWFVR AVRAPQSSTR VFGLALIGIL LMHALVEYPQ QYMFFLLPAM FVIGLLDVKP
LRVLPGRAAF GLFAVLSVGG VLAVVPVLRD YQRAEVLYYG SDPAAQYRDA PSQLFGAWGD
YGVATLLTIS PENLPLKLAA HERAIALLPG ETVLRRYAAL QALAGRDADA LDTVARLHVF
AKELKDWPQQ LALLYKLCDQ QPALKAFKAA VVAKYGEVPA DADEDDSDDD SE
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