| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2666 |
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| Symbol | |
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| ID | 4310012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 2936201 |
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| End bp | 2937817 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638150504 |
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| Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
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| Protein accession | YP_774556 |
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| Protein GI | 115352717 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCACTT GTCTCTACAA TGTGCGCTCC GGCGCGCCGC GCGCCCCGCC CGAACCCCTG
CATTTCCCGT ATTCGCCCAT GCCGATTTCC GATCTCTCCG CCCGGTTCGC CCCCCGCGCC
CGCGCCCGCG TCTGCCTGCG GGCGGCCGCC GTCGTCGCCA CCTGCACGGC CCTTGCGTTC
GCACCTTCCG CGCAGGCCCG CAAGAAGCTT CACAAGGAAG CGCGCAAGAC CGCCGTCGTG
TCGCCCGCCG CGCGCGCGGC CGGCCTGCCG GCGTCCGTGC TGGTCGCGCT GCAGCGCGCG
AAGGTGCCGG CATCGGCGAT GAGCGTCGTC GTCGAGCGCG TCGGCGATCC CGAGCCGCTG
ATCGAATGGA ACGCGAACCG GCCGATGCTG CCGGCGTCGA CGATGAAGCT CGTCACGACC
TTCTCGGGCC TGTCGATCCT CGGCCCCGAC TTCCGCTGGC GCACCACCGC GTATGCGGAC
GGCCCGGTCG ATCCGGACGG CACGCTGCAA GGCAACCTGT ACATCAAGGG CACCGGCGAT
CCGAAGCTCG TGCCCGAGGA GCTGATCGAC CTCGTCGACA AGCTCCGCAA GGCGGGCGTC
AAGCGCGTGG CCGGCGGCCT CGTGCTCGAC AAGAGCTATT TCGCCGCGTC GACGCGCGAC
CTGCCGTCGT TCGACGACGA CGTGAGCGCA CCGTACAACG TCGGCCCCGA TCCGCTGCTG
TACGCGTTCA AGGCCGTGTC GTTCACGGTG ACGCCGGGCG ACGACGGCAA GATCGCCGTC
GATGTGCTGC CGCCGCTCGC CAATCTGTCG ATCGACAACC AGCTGTACGA AGGCAGCGGA
TCGTGCGGCG CGGCCGCCGC GGCCGCGCGT CCGACGCTGA CGGCCGGCAG CGGGATCATG
ACCGCGTCGT TCGCCGGCGA CTATCCGCTG CGCTGCGGCG CGCGCACGAC CAATCTCGCG
ATCCTCGATC ACACGACGTT CTTCGCGCGC GGCTTCCTCG CGCTGTGGCA GCAGGACGGC
GGCACGATCG CGGGCCCGGT CAGCGAAGGC AAGGTGCCCA CCACCGCGCG CCCGCTCGCC
GTCCATCACA GCCCGGTGCT CGGCAGCATC GTCTACGACA TCAACAAGTT CAGCAACAAC
GTGATGGCGC GCAACCTGTT CCTGACGATC GGCGCGGTCG CCGGCAAGCC GCCTGCGACA
CCCGAGCAGT CGAGCCGCGC GATTCAGGCA TTCCTGCGCA AGAGCGGGAT CGCGATGCCC
GACCTCGCGC TCGAGAACGG CTCGGGCCTG TCGCGCGACG AGCACGTGAG CGCGCTGTCG
CTCGCCGCGC TGCTGCAGGC CGCGAACGCG AGCCCGGTCG CGCAGGCGTT CGTCGATTCG
CTGCCGGTCG CCGGCATCGA CGGCACGATG AAGAACCGCC TGACCAACGC CGGCGTGCTC
GGCAATGCGC ACATCAAGAC GGGCACGCTG CGCGACGTGC GCGCGATCGC GGGCTACGTC
GCGGGCGCGG ACGGCCAGAG CTACGTCGTC GTCAGTTTCA TCAACGACGA TCACGCGGAA
GCCGCGCGCG CCGCGCACGA CACGCTGCTC GAATGGATCT ACGCGGGCGC GCACTGA
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| Protein sequence | MRTCLYNVRS GAPRAPPEPL HFPYSPMPIS DLSARFAPRA RARVCLRAAA VVATCTALAF
APSAQARKKL HKEARKTAVV SPAARAAGLP ASVLVALQRA KVPASAMSVV VERVGDPEPL
IEWNANRPML PASTMKLVTT FSGLSILGPD FRWRTTAYAD GPVDPDGTLQ GNLYIKGTGD
PKLVPEELID LVDKLRKAGV KRVAGGLVLD KSYFAASTRD LPSFDDDVSA PYNVGPDPLL
YAFKAVSFTV TPGDDGKIAV DVLPPLANLS IDNQLYEGSG SCGAAAAAAR PTLTAGSGIM
TASFAGDYPL RCGARTTNLA ILDHTTFFAR GFLALWQQDG GTIAGPVSEG KVPTTARPLA
VHHSPVLGSI VYDINKFSNN VMARNLFLTI GAVAGKPPAT PEQSSRAIQA FLRKSGIAMP
DLALENGSGL SRDEHVSALS LAALLQAANA SPVAQAFVDS LPVAGIDGTM KNRLTNAGVL
GNAHIKTGTL RDVRAIAGYV AGADGQSYVV VSFINDDHAE AARAAHDTLL EWIYAGAH
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