Gene Bamb_2657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2657 
Symbol 
ID4310003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand+ 
Start bp2928089 
End bp2928730 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content65% 
IMG OID638150495 
ProductTetR family transcriptional regulator 
Protein accessionYP_774547 
Protein GI115352708 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCAGAC GTACCAAGGA GGAGGCGCTC GAGACGCGCA ACCGCATTCT CGATGCCGCC 
GAGCACGTGT TCTTCGAGAA GGGCGTGTCG CACACGTCGC TCGCGGACAT CGCCCAGCAC 
GCCGGCGTGA CGCGCGGCGC GATCTACTGG CATTTCGCGA ACAAGAGCGA GCTGTTCGAT 
GCGATGTTCG ACCGCGTGTT CCTGCCGATC GACGAGCTCA AGCGAATGCC GCACGACGCG 
CCCGGCGGCA ATCCGCTCGA CACGATTCGC AAGATTCTGA TCTGGTGCCT GCTCGGCGTG 
CAGCGCGACT CGCAGTTGCG ACGCGTGTTC AGCATCCTGT TCATGAAGTG CGAATACGTC 
GCGGACATGG AGCCGCTGCT GCAGCGCAAC CGCGCGGGGA TGAGCGAGGC GCTGCACGCG 
ATCGATGCCG ATCTCGCGGT CGCCGTCCGG CTCAAGCTGC TGCCCGAGCG GCTCGACACA 
TGGCGCGCGA CGCTGATGCT GCACACGCTC GTCAGCGGTT TCGTGCGCGA CATGCTGATG 
CTGCCCGACG AAATCGACGC CGAGCAGCAT GCGGAAAAAC TCGTCGACGG CTGCTTCGAC 
ATGCTGCGCT ACAGCCCGGC GATGCTGAAG ACGGGCGACT GA
 
Protein sequence
MVRRTKEEAL ETRNRILDAA EHVFFEKGVS HTSLADIAQH AGVTRGAIYW HFANKSELFD 
AMFDRVFLPI DELKRMPHDA PGGNPLDTIR KILIWCLLGV QRDSQLRRVF SILFMKCEYV 
ADMEPLLQRN RAGMSEALHA IDADLAVAVR LKLLPERLDT WRATLMLHTL VSGFVRDMLM 
LPDEIDAEQH AEKLVDGCFD MLRYSPAMLK TGD