| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2630 |
|---|
| Symbol | |
|---|
| ID | 4311355 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 2893314 |
|---|
| End bp | 2894765 |
|---|
| Gene Length | 1452 bp |
|---|
| Protein Length | 483 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638150468 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_774520 |
|---|
| Protein GI | 115352681 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.172845 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACCG TATCGATGCT GATCGGCGGC CAACGCCGTC ATTCGTCCAG CGGCGCGACC
TTCGTGCGCC GCAACCCGCT CGACGGCGAA GTCGCGTCGG CCGCGCCTGC CTGTACGGTC
GACGATGCGC GCGCGGCGGC CGACGCGGCC GCGCGCGCGT TGCCCGAATG GGCGGCGCTT
GGCCCCGGCG CGCGCCGCGC GCTGCTGCTG AAGGCGGCCG CCGCGCTCGA AGCGAAGCAC
GAGCAGTTCG TCGCCGCGAT GGCGGCCGAA ACCGGCGCGT CGGCGCTGTG GGCCGGCTTC
AACGTGCAGC TTGCCGCGAG CGGGCTCGTC GAGGCCGCGT CGCTGACCAC GCAGGTTGGT
GGCGAGTTGA TCCCGTCGGA CGTGCCCGGT TCGCTCGCGA TGGGCGTGCG ACAGCCGGCC
GGCGTCGTGC TCGGCATCGC GCCGTGGAAC GCGCCGGTGA TCCTCGCGAC GCGCGCGCTC
GCGCTGCCGC TCGCGTGCGG CAACACGATC GTGCTCAAGG GCTCCGAACT GTGCCCGGTC
ACGCACGGGC TGGTGGTCGA GGCGCTGCAG GAGGCCGGGC TGCCGGCGGG TGTCGTGAAC
TTCGTGACGA ACGCGCCCGA GGACGCGGGC GCGGTCGTCG ACGCACTGAT CGCGCATCCG
GCCGTGCGCC GCGTGAATTT CACCGGATCG ACACGCGTCG GGCGGATCAT CGCCGAAGCG
TGCGCGCGTC ATCTGAAACC GTCGGTGCTC GAACTCGGCG GCAAGGCGCC GTTCGTCGTG
CTCGACGATG CGGATCTCGA CGCGGCGGTC GCGGCGGCCG CGTTCGGCGC GTTCGCGAAT
TCCGGGCAGA TCTGCATGTC GACCGAGCGG ATCATCGTCG ACGCATCGAT CGCCGACGCG
TTCGTCGCGA AGCTCGCCGC CCGGGCCGCG TCGCTGCCGC TGGGCGACCC GCGCCACGGG
CCCGTCGTGC TCGGCTCGCT GATCGACATG AAGGCCGTCG AGCGCTGCAA CACGCTGATC
GACGATGCGC TCGCGCACGG CGCGACGCTG CTGTGCGGCG GCCGGTCCGA CACCACGCTG
TTCCCGGCGA CGCTGCTCGA TCGCGTGACG CCCGCGATGC GGATCTACGC GGAGGAGTCG
TTCGGGCCGG TGAAGGGCAT CGTGCGGGTC GACGGCGAGG CGGCCGCGAT CGACTGCGCG
AACGACAACG CGTTCGGGCT GTCGTCGGCG GTGTTCAGCC GCGACGTCGC GCGCGCGATG
CGCGTCGCGG CGCGCATCGA GTCGGGCATC TGCCATGTGA ACGGCCCGAC CGTGCACGAC
GAGGCGCAGA TGCCGTTCGG CGGCGTGAAG GACAGCGGCT TCGGGCATTT CGGCGGCAAG
GCCGGCATCG CCGCGTTCAC GGACCTGCGC TGGATCACCG TGCAGACCAC GCCGCGCCAC
TATCCGTTCT GA
|
|---|
| Protein sequence | MQTVSMLIGG QRRHSSSGAT FVRRNPLDGE VASAAPACTV DDARAAADAA ARALPEWAAL
GPGARRALLL KAAAALEAKH EQFVAAMAAE TGASALWAGF NVQLAASGLV EAASLTTQVG
GELIPSDVPG SLAMGVRQPA GVVLGIAPWN APVILATRAL ALPLACGNTI VLKGSELCPV
THGLVVEALQ EAGLPAGVVN FVTNAPEDAG AVVDALIAHP AVRRVNFTGS TRVGRIIAEA
CARHLKPSVL ELGGKAPFVV LDDADLDAAV AAAAFGAFAN SGQICMSTER IIVDASIADA
FVAKLAARAA SLPLGDPRHG PVVLGSLIDM KAVERCNTLI DDALAHGATL LCGGRSDTTL
FPATLLDRVT PAMRIYAEES FGPVKGIVRV DGEAAAIDCA NDNAFGLSSA VFSRDVARAM
RVAARIESGI CHVNGPTVHD EAQMPFGGVK DSGFGHFGGK AGIAAFTDLR WITVQTTPRH
YPF
|
|---|
| |