Gene Bamb_2611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2611 
Symbol 
ID4311336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2874174 
End bp2875691 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content69% 
IMG OID638150449 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_774501 
Protein GI115352662 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGATCA AACCGTTCCG CTCGATCGAA TCGGCGGCCA CCGCGACGCA CAACTGGCGG 
CGCCGCCAGA TCCTGCGCGC GGGCGCGTCG ACGCTGGTGC TCGGTCTCGC CGCACCGCGG
CTCGCGCACG CGTCGTCGGT GCTCGGCGTG CGCGTGTGGC CCGCGCGCGA TTACACGCGC
GTCACGATCG AATCGGACCA GCCGCTGCAG AATAGCCAAC AGCTGTTGCA GGGCCCCGAC
CGGCTCGTCG TCGACCTGAG CGGGCTCGAT CTCGATCAGG CCCTGCGCGA CCTCGTGTCG
AAGATCGCGC CGAACGATCC GCAGATCCAG TCGGTGCGCG TCGGCCAGTA CCAGCCGCAC
GTCGTGCGGA TGGTGTTCGA CCTGAAAGGC TCGGTGAAGC CGCAGGTGTT CACGCTGCCG
CCGGTGGGCA CCTACAAGTA CCGGCTCGTG TTCGACCTGT ATCCGGCCGT CGCGCCCGAT
CCGCTGTCCG ACCTGATCGC GCAGACGGAA CGCAAGGAAC AGGCGCTCAA CGACACCGCG
CGCGCGCAGC AAATGCAGCC GCCGACCTCG CTCGCGGGGC CGGCCGCGCC GTCGGCACCC
GCCGCGGGCG ACAACACCGA CGCGTTCTTC CAGCGCTTCG CGCAGAACAC GCCGGCCACG
CCGCGCACGC CGCCGGCCGC CGCGACGCCT TCCACGCCCG CGAAGCCGGC CGTCAAGCCG
CCGCCCGTCA TCGCGCGCCG CGACGACAGC GACGACGACG GCGACACCTA CAAGTTCACC
GCACCGAAAT CCGGCAAGGG CGGCACCATG CGCCTGCTGA CGGTCGCGAT CGATCCGGGC
CACGGCGGCG AGGATCCGGG CGCGATCGGC GGCGGCGGCA CGTACGAGAA GCACATCGCG
CTCGACATCG CGAAGAAGCT GCGCGCGAAG ATCGACGGCG CGCCGAACAT GCGCGCGATG
ATGACGCGCG ACGCCGACTT CTTCGTGCCG CTGAACGTGC GCGTGCAGAA GGCGCGCCGC
GTCGGCGCCG ACCTGTTCGT GTCGATCCAC GCGGATGCGT TCACGACGCC TTCCGCGCGC
GGCTCGTCGG TGTTCGCGCT GTCCGACCAC GGCGCGACGA GCGCCGCGGC ACGCTGGATG
GCGAACAAGG AAAACTCGTC GGACCTGATC GGCGGCATCA ACATCAAGAC GCAGGACGCG
GCCGTGAGCC GCGCGCTGTT CGACATGTCG ACGACCGCGC AGATCCGCGA TTCGCTGCGC
TACGGCGGCT ACGTGCTGAA GGAAGTCGGC GGCATCAACA AGCTGCACAA GGGTTCGGTC
GAGCAGGCCG GATTCGCGGT GCTGAAGGCA CCCGACATTC CGTCGATCCT CGTCGAGACC
GCGTTCATCA GCAACCCGGA AGAAGAGAGC CGGCTGAACG ACGAAAGCTA TCGCGACCAG
ATGGCCGACG CGATCTTCCG CGGCATCAAG CGTTACTTCG CCGCGAACCC ACCGCTCGCG
AAGAACCGGA TGGCCTGA
 
Protein sequence
MLIKPFRSIE SAATATHNWR RRQILRAGAS TLVLGLAAPR LAHASSVLGV RVWPARDYTR 
VTIESDQPLQ NSQQLLQGPD RLVVDLSGLD LDQALRDLVS KIAPNDPQIQ SVRVGQYQPH
VVRMVFDLKG SVKPQVFTLP PVGTYKYRLV FDLYPAVAPD PLSDLIAQTE RKEQALNDTA
RAQQMQPPTS LAGPAAPSAP AAGDNTDAFF QRFAQNTPAT PRTPPAAATP STPAKPAVKP
PPVIARRDDS DDDGDTYKFT APKSGKGGTM RLLTVAIDPG HGGEDPGAIG GGGTYEKHIA
LDIAKKLRAK IDGAPNMRAM MTRDADFFVP LNVRVQKARR VGADLFVSIH ADAFTTPSAR
GSSVFALSDH GATSAAARWM ANKENSSDLI GGINIKTQDA AVSRALFDMS TTAQIRDSLR
YGGYVLKEVG GINKLHKGSV EQAGFAVLKA PDIPSILVET AFISNPEEES RLNDESYRDQ
MADAIFRGIK RYFAANPPLA KNRMA