| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2607 |
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| Symbol | xerD |
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| ID | 4311332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 2870877 |
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| End bp | 2871845 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638150445 |
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| Product | site-specific tyrosine recombinase XerD |
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| Protein accession | YP_774497 |
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| Protein GI | 115352658 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAC CGTTGCTTTC CCCCGACTCC GCGTCCGACA CCGATACCGC TAGCGACGCG
GCCGCCGCAT CGCCGGCGCT GCTCGCGAGC CGCGCGTCGA TCGACGTGTT CTGCGATGCG
CTGTGGCTCG AGCACGGGCT CGCGCGCAAT ACGCTCGATG CGTACCGGCG CGATCTGGTG
CTGTTTTCGC AATGGCTGGC CGCGACGCAC GACGTGCCGC TCGACTCGGC CGACGAAGCG
ATGTTGATCG GCTACATCGC CGCGCGCAGC GACGGCAAGG CGACATCGTC GAACCGGCGC
TTGTCGGTGT TCCGTCGCTA TTACGGCTGG GCCGTGCGCG AGCACCACGC GAGCGCGGAC
CCGACGCTGC GGATCACGTC GGCGAAGCAG GCCGCGCGGT TTCCGTCGAC GCTGTCCGAG
GCACAGGTCG AGGCACTGCT CGGTGCGCCC GACATCGGCA CGCCGCTTGG CCTGCGCGAT
CGCACGATGC TCGAGCTGAT GTATGCGAGC GGGCTGCGCG TGAGCGAGCT CGTCACGCTG
AAGACCGTCG AGGTCGGGCT CAACGAGGGC GTCGTGCGCG TGATGGGCAA GGGCTCGAAG
GAACGGCTCG TGCCGTTCGG CGAAGTCGCG CACGGCTGGA TCGAGCGCTA CCTGCGCGAC
GCGCGGCCGG CGCTGCTCGG CGCACGCGCG GCCGACGCGC TGTTCGTGAC CGCGCGCGGC
GACGGGATGA CGCGCCAGCA GTTCTGGAAC ATCATCAAGC GCCACGCGCA GCAGGCTGAC
GTGCGCGCGC ACCTGTCGCC GCATACGCTG CGGCACGCGT TCGCGACGCA CCTGCTGAAC
CACGGCGCCG ACCTGCGCGT CGTGCAGCTG CTGCTCGGTC ACAGCGATAT CTCCACCACG
CAGATCTACA CGCACGTCGC ACGCGAGCGG CTCAAGACGC TGCACGCGAC GCACCATCCG
CGCGGCTAG
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| Protein sequence | MSEPLLSPDS ASDTDTASDA AAASPALLAS RASIDVFCDA LWLEHGLARN TLDAYRRDLV
LFSQWLAATH DVPLDSADEA MLIGYIAARS DGKATSSNRR LSVFRRYYGW AVREHHASAD
PTLRITSAKQ AARFPSTLSE AQVEALLGAP DIGTPLGLRD RTMLELMYAS GLRVSELVTL
KTVEVGLNEG VVRVMGKGSK ERLVPFGEVA HGWIERYLRD ARPALLGARA ADALFVTARG
DGMTRQQFWN IIKRHAQQAD VRAHLSPHTL RHAFATHLLN HGADLRVVQL LLGHSDISTT
QIYTHVARER LKTLHATHHP RG
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