Gene Bamb_2599 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2599 
Symbol 
ID4311324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2861891 
End bp2863441 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content67% 
IMG OID638150437 
Productintegral membrane protein MviN 
Protein accessionYP_774489 
Protein GI115352650 
COG category[R] General function prediction only 
COG ID[COG0728] Uncharacterized membrane protein, putative virulence factor 
TIGRFAM ID[TIGR01695] integral membrane protein MviN 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTAT TCCGAGCCCT GCTGACGGTC AGCGGCTTCA CGCTGCTGTC GCGCGTGACC 
GGACTGGCCC GCGAGACGCT GATCGCCCGT GCGTTCGGCG CCAGTCAATA CACCGACGCG
TTCTACGTCG CCTTCCGTAT TCCGAACCTG CTGCGCCGCC TGTCCGCCGA AGGCGCGTTC
TCGCAGGCGT TCGTGCCGAT CCTGGCCGAG TTCAAGAACC AGCAGGGGCA CGATGCGACC
AAGGCGCTCG TCGACGCGAT GTCGACCGTC CTCGCGTGGG CGCTCGCCGT GCTGTCGGTC
GTCGGGATCG CCGGCGCGTC GTGGGTCGTG TTCGCGGTTG CGTCCGGCCT GCGTACCGAC
GGGCAGGCCT TCCCGCTCGC GGTCACGATG ACGCGGATCA TGTTCCCGTA CATCGTGTTC
ATCTCGCTGA CGACGCTCGC GTCCGGCGTG CTCAACACCT ACAAGAGCTT CTCGCTGCCC
GCGTTCGCGC CGGTGCTGCT CAACGTCGCG TTCATCGCCG CGGCCGTGTT CGTCGCGCCC
CATCTGAAGG TGCCGGTGTA CGCGCTCGCG TGGGCCGTCA TCGTGGGCGG CGTGCTGCAG
TTCCTCGTGC AACTGCCGGG GCTGAAGAAG ATCGACATGG TGCCGCTGAT CGGCATCAAC
CCGCTGCGCG CGCTGCGCCA CCCGGGCGTG AAGCGCGTGC TCGCGAAGAT GGTGCCCGCG
ACGTTCGCGG TGTCGGTCGC GCAGCTGTCG CTGATCATCA ACACCAACAT CGCGTCGCGG
CTCGGGCAGG GCGCGGTGTC GTGGATCAAC TACGCCGACC GTCTGATGGA GTTCCCGACG
GCGCTGCTCG GCGTCGCGCT CGGCACGATC CTGCTGCCGA GTCTGTCGAA GGCGCACGTC
GACGCCGATA CGCACGAGTA TTCGTCGCTG CTCGACTGGG GGCTGCGCGT CACGTTCCTG
CTCGCGGCGC CGAGCGCGCT CGCGCTGTTC TTCTTCGCGA CGCCGCTCAC CGCGACGCTG
TTCAACTACG GCAAGTTCGA CGCGCATACC GTCACGATGG TCGCCCGCGC GCTCGCGACC
TACGGGATCG GCCTCGTCGG CATCATCCTG ATCAAGATCC TCGCGCCGGG CTTCTATGCG
AAGCAGGACA TCAAGACGCC GGTGAAGATC GCGGTCGGCG TGCTGATCGT CACGCAGCTG
TCGAACTACG TGTTCGTGCC GCTGATCGGT CATGCGGGCC TCACGCTGAG CATCGGCGTC
GGCGCGTGCC TGAACTCGCT GCTGCTGTTC CTCGGGCTGC GCAAGCGCGG CATCTACCAG
CCGTCGCCGG GCTGGCCGCG CTTCTTCGTG CAGCTCGTCG GCGCGGCGCT CGTGCTCGCG
GGCCTGATGC ATTGGTGCGC GATCAGCTTC GACTGGACCG GCATGCGCGC GCAGCCGCTC
GATCGCATCG CGCTGATGGC CGCGTGCCTC GTGCTGTTCG CTGCACTATA TTTCGGTATG
TTGTGGGTAA TGGGCTTCAA ATACGCTTAC TTCAGAAGGC GCGCCAAGTG A
 
Protein sequence
MNLFRALLTV SGFTLLSRVT GLARETLIAR AFGASQYTDA FYVAFRIPNL LRRLSAEGAF 
SQAFVPILAE FKNQQGHDAT KALVDAMSTV LAWALAVLSV VGIAGASWVV FAVASGLRTD
GQAFPLAVTM TRIMFPYIVF ISLTTLASGV LNTYKSFSLP AFAPVLLNVA FIAAAVFVAP
HLKVPVYALA WAVIVGGVLQ FLVQLPGLKK IDMVPLIGIN PLRALRHPGV KRVLAKMVPA
TFAVSVAQLS LIINTNIASR LGQGAVSWIN YADRLMEFPT ALLGVALGTI LLPSLSKAHV
DADTHEYSSL LDWGLRVTFL LAAPSALALF FFATPLTATL FNYGKFDAHT VTMVARALAT
YGIGLVGIIL IKILAPGFYA KQDIKTPVKI AVGVLIVTQL SNYVFVPLIG HAGLTLSIGV
GACLNSLLLF LGLRKRGIYQ PSPGWPRFFV QLVGAALVLA GLMHWCAISF DWTGMRAQPL
DRIALMAACL VLFAALYFGM LWVMGFKYAY FRRRAK