| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2597 |
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| Symbol | |
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| ID | 4308932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 2860199 |
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| End bp | 2860957 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638150435 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_774487 |
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| Protein GI | 115352648 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGATTC GCGGCAACGT CTTTCTGATC ACGGGCGGCG CATCGGGCCT CGGCGCCGGC
ACGGCGCGCA TGCTCGCGCA GGCCGGCGGC AAGGTCGTGC TCGCCGACCT GAACGAGGCG
GCCGGCACGG CGCTCGCGAG CGAACTGGGT GGCATATTCG TGCGCTGCGA CGTGTCGAGC
GAGGCCGATG CGCAGGCAGC TGTGGACGCC GCGACGCGCG CGGGCACGCT GCGCGGCCTC
GTGAACTGCG CGGGCATCGC GCCTGCCGCG AAAACCGTCG GCAAGGACGG CGCGCATCCG
CTCGACGTGT TCGCGAAGAC GATCAACGTG AACCTGGTCG GCACCTTCAA CATGATCCGG
CTCGCGGCCG CCGCGATGGC CGCGACTACG CCGAACGACG GCGGCGAGCG CGGCGTGATC
GTCAGCACCG CATCGGTCGC CGCCTACGAC GGCCAGATCG GCCAGGCCGC GTACGCGGCG
TCAAAGTCCG GCGTCGCGGG CATGACGCTG CCGATCGCGC GCGACCTCGC GCGCCAGGGC
ATCCGCGTGA TGACGATCGC GCCGGGGCTG TTCGAGACGC CGATGCTGCT CGGCATGCCG
AAGGACGTGC AGGACGCGCT CGGCGCGATG GTGCCGTTCC CGCCGCGGCT CGGCAAACCG
GACGAATACG CGATGCTGGT GCGCCAGATC GTCGAGAACC CGATGCTCAA CGGCGAAGTG
ATCCGCCTCG ACGGCGCGAT CCGGATGCAG CCGAAATAA
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| Protein sequence | MEIRGNVFLI TGGASGLGAG TARMLAQAGG KVVLADLNEA AGTALASELG GIFVRCDVSS
EADAQAAVDA ATRAGTLRGL VNCAGIAPAA KTVGKDGAHP LDVFAKTINV NLVGTFNMIR
LAAAAMAATT PNDGGERGVI VSTASVAAYD GQIGQAAYAA SKSGVAGMTL PIARDLARQG
IRVMTIAPGL FETPMLLGMP KDVQDALGAM VPFPPRLGKP DEYAMLVRQI VENPMLNGEV
IRLDGAIRMQ PK
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