Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2572 |
Symbol | |
ID | 4308907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 2833127 |
End bp | 2834383 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638150410 |
Product | isocitrate dehydrogenase |
Protein accession | YP_774462 |
Protein GI | 115352623 |
COG category | [C] Energy production and conversion |
COG ID | [COG0538] Isocitrate dehydrogenases |
TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGTATC AGCACATCAA GGTTCCGGAG GGCGGTGACA AGATCACCGT CAACAAGGAC TACTCGCTCA ACGTTTCCGA TCAGCCGATC ATTCCCTATA TCGAAGGCGA CGGTACGGGC TTCGATATCA CGCCGGTCAT GATCAAGGTC GTCGACGCGG CGGTGGCCCA TGCCTACAAG GGCAAGCGCA AGATCCACTG GATGGAGATC TTCGCGGGCG AGAAGGCGAC GAAGGTGTAC GGTCCGGACG TGTGGCTGCC GGACGAAACG CTGCAGGTGC TGAAGGAATA CGTGGTGTCG ATCAAGGGGC CGCTCACGAC CCCGGTCGGC GGCGGCATCC GTTCGCTGAA CGTCGCGCTG CGCCAGGAAC TCGACCTGTA CGTGTGCCTG CGCCCGGTCC AGTATTTCAA GGGCGTGCCG TCGCCGGTGC GCGAGCCGCA AAAGATCGAC ATGGTGATCT TCCGCGAGAA CTCGGAAGAC ATCTACGCGG GCATCGAGTG GGCCGCGGGC TCCGAGCAGG CGAAGAAGGT GATCAAGTTC CTGCAGGACG AGATGGGCGT GAAGAAGATC CGCTTCCCGG AAACTTCGGG GATCGGCGTC AAGCCCGTGT CGACCGAAGG CACCGAGCGT CTCGTGCGCA AGGCGATCCA ATACGCGATC GACAACGATC GCAAGTCGGT CACGCTGGTG CACAAGGGCA ACATCATGAA GTTCACGGAA GGCCTGTTCC GTGACGCCGG CTACGCGCTC GCGCAGAAGG AATTCGGCGG CGAGCTGATC GACGGCGGCC CGTGGATGCG CGTGAAGAAC CCGAAGACGG GCAACGAGAT CGTCATCAAG GATTCGATCG CCGATGCATT CCTGCAGCAG ATCCTGCTGC GTCCGGCCGA ATACGACGTG ATCGCGACGC TGAACCTGAA CGGCGACTAC ATCTCCGACG CACTGGCCGC GCAGGTCGGC GGCATCGGGA TCGCGCCGGG CGCGAACCTG TCGGATTCGG TCGCGATGTT CGAGGCGACG CACGGCACGG CGCCCAAGTA CGCGGGCAAG GATTACGTGA ACCCCGGTTC CGAGATCCTG TCGGCGGAAA TGATGCTGCG CCACCTCGGC TGGACGGAAG CGGCCGACAC GATCATCGCC GCGATGGAAA AGTCGATCCT GCAGAAGCGC GTCACGTACG ACTTCGCGCG CCTGATGGAA GGCGCGACGC AGGTGTCGTG CTCCGGCTTC GGCGAAGTGC TGATCGAGAA CATGTAA
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Protein sequence | MPYQHIKVPE GGDKITVNKD YSLNVSDQPI IPYIEGDGTG FDITPVMIKV VDAAVAHAYK GKRKIHWMEI FAGEKATKVY GPDVWLPDET LQVLKEYVVS IKGPLTTPVG GGIRSLNVAL RQELDLYVCL RPVQYFKGVP SPVREPQKID MVIFRENSED IYAGIEWAAG SEQAKKVIKF LQDEMGVKKI RFPETSGIGV KPVSTEGTER LVRKAIQYAI DNDRKSVTLV HKGNIMKFTE GLFRDAGYAL AQKEFGGELI DGGPWMRVKN PKTGNEIVIK DSIADAFLQQ ILLRPAEYDV IATLNLNGDY ISDALAAQVG GIGIAPGANL SDSVAMFEAT HGTAPKYAGK DYVNPGSEIL SAEMMLRHLG WTEAADTIIA AMEKSILQKR VTYDFARLME GATQVSCSGF GEVLIENM
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