| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2571 |
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| Symbol | |
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| ID | 4308906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 2830616 |
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| End bp | 2832844 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638150409 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_774461 |
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| Protein GI | 115352622 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.124358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCACTT CGCCCAAGAT CATCTACACC CTCACCGACG AAGCGCCCGC GCTCGCGACC
TATTCGCTGC TGCCGATCGT CAAGGCCTTC ACGCGCTCGT CCGGCGTCGC CGTCGAAACG
CGCGACATCT CGCTTGCCGG CCGCATCATC GCGGCATTCG CCGACGTCCT GCCGCCGGAG
CAGAAGGGTT CCGACGATCT GGCCGAACTG GGCCAGCTCA CGCTGAAGTC GGAAGCGAAC
ATCATCAAGC TGCCGAACAT CAGCGCGTCG GTGCCGCAGC TCAAGGCCGC GATCGCCGAA
CTGCAGGCGC AGGGCTACAA GCTGCCGGCG TATCCGGAAG ATCCGACGAC CGACGAAGAA
AAGGCGGTCA AGGCCCGCTA CGACAAGATC AAGGGCAGCG CGGTGAACCC GGTGCTGCGC
GAAGGCAACT CCGATCGCCG CGCGCCGCTG TCGGTGAAGA ACTACGCCCG CAAGCACCCG
CACAAGATGG GCGCATGGAA GGCCACGTCG AAGGCGCACG TCGCGCACAT GAGCGAAGGC
GACTTCTACG GCAGCGAAAA GTCGGCGCTG ATCGCCGCGG CCGGCAGCGT GAAGATCGAA
CTCACGACGA CCGACGGCGT GAAGAAGGTG CTGAAGGAAA AGACGGCCGT GAAGGCCGAT
GAAATCATCG ACGCATCGGT GATGAGCCGC AAGGCGCTGC GCAGCTTCAT CGAAGCGCAG
ATCGCCGACG CGAAGGCGCA GGACGTGCTG TTCTCGGTGC ACCTGAAGGC GACCATGATG
AAGGTCTCGG ACCCGATCCT GTTCGGTCAC TTCGTGTCGG TGTTCTACAG CGACGCGCTC
ACCAAGCACG CGGACGTGCT CGCGAAACTC GGCTTCAACC CGAACAACGG GATCGGCGAC
CTGTACGCGC GCCTGAAGGA CCTGCCGGCC GACACGCGCG AAGCGATCGA AGCCGACGTC
AAGGCTGAAT ACGCGGTGCG CCCGCGTCTC GCGATGGTCA ACTCGGACAA GGGCATCACG
AACCTGCACG TGCCGAGCGA CGTGATCGTC GACGCATCGA TGCCGGCGAT GATTCGCGAC
TCGGGCGGCA TGTGGGGCCC GGACGGCGAA CTGTCCGACG CGAAGGCCGT GATTCCGGAC
CGCTGCTACG CGGGCGTCTA CCAGGCCGTG ATCGAAGACT GCAAGCAGCA CGGCGCATTC
GACCCGGTCA CGATGGGCAG CGTGCCGAAC GTCGGCCTGA TGGCGCAGGC GGCCGAGGAA
TACGGTTCGC ACGACAAGAC GTTCCTGATC CCGACCGATG GCGTCGTGCG CGTCACGGAC
GAAGCCGGCA ACGTGCTGCT CGAGCACGCG GTCGAGTCGG GCGACATCTG GCGCATGTGC
CAGACGAAGG ACGCACCGGT GCAGGACTGG GTCAAGCTCG CGGTGAACCG TGCCCGCGCG
ACCGGCGCGC CGGCCGTGTT CTGGCTCGAT CCGGCCCGTG CGCACGACGC GCAGATCATC
GCGAAGGTCG AACGCTATCT GAAGGATCAC GACACGAACG GCCTCGACAT CCGCATCATG
ACGCCGGTCG ACGCGACGCG TTTCTCGCTC GAGCGCATCC GCGCGGGCAA GGACACGATC
TCGGTCACGG GCAACGTGCT GCGCGACTAC CTGACCGACC TGTTCCCGAT CATGGAACTC
GGCACCAGCG CGAAGATGCT GTCGATCGTG CCGCTGATGG CCGGCGGCGG GATGTTCGAA
ACGGGCGCGG GCGGCTCGGC ACCGAAGCAC GTGCAGCAGT TCGTCGAGGA AGGCTTCCTG
CGCTGGGATT CGCTCGGCGA ATTCCTCGCG CTGGCCGCGT CGCTCGAACA CCTCGGCCAC
GCTTACCAGA ACCCGAAGGC GCTCGTGCTC GCGAAGACGC TCGACCAGGC GACCGGCAAG
TTCCTGGAGG AGAACAAGTC GCCCGCACGC AAGGTCGGCG GCCTCGACAA CCGCGGCAGC
CACTTCTACC TGTGCCTGTA CTGGGCGCAG GCGCTGGCCG AGCAGACCGA TGATGCCGCG
CTGAAGGCGC AGTTCGAAGG CGTCGCGAAG TCGCTGGCCG ACAGCGAAGC GCGCATCCTG
GAAGAACTGT CGGCCGCGCA GGGCACCGCG CAGGCGATCG GCGGCTACTA CCGTCCGAAC
GTCGAGCTGA CGAGCCAGGC GATGCGCCCG AGCGCAACGC TGAACGCCAT CGTCGACGCA
GTCGCCTGA
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| Protein sequence | MSTSPKIIYT LTDEAPALAT YSLLPIVKAF TRSSGVAVET RDISLAGRII AAFADVLPPE
QKGSDDLAEL GQLTLKSEAN IIKLPNISAS VPQLKAAIAE LQAQGYKLPA YPEDPTTDEE
KAVKARYDKI KGSAVNPVLR EGNSDRRAPL SVKNYARKHP HKMGAWKATS KAHVAHMSEG
DFYGSEKSAL IAAAGSVKIE LTTTDGVKKV LKEKTAVKAD EIIDASVMSR KALRSFIEAQ
IADAKAQDVL FSVHLKATMM KVSDPILFGH FVSVFYSDAL TKHADVLAKL GFNPNNGIGD
LYARLKDLPA DTREAIEADV KAEYAVRPRL AMVNSDKGIT NLHVPSDVIV DASMPAMIRD
SGGMWGPDGE LSDAKAVIPD RCYAGVYQAV IEDCKQHGAF DPVTMGSVPN VGLMAQAAEE
YGSHDKTFLI PTDGVVRVTD EAGNVLLEHA VESGDIWRMC QTKDAPVQDW VKLAVNRARA
TGAPAVFWLD PARAHDAQII AKVERYLKDH DTNGLDIRIM TPVDATRFSL ERIRAGKDTI
SVTGNVLRDY LTDLFPIMEL GTSAKMLSIV PLMAGGGMFE TGAGGSAPKH VQQFVEEGFL
RWDSLGEFLA LAASLEHLGH AYQNPKALVL AKTLDQATGK FLEENKSPAR KVGGLDNRGS
HFYLCLYWAQ ALAEQTDDAA LKAQFEGVAK SLADSEARIL EELSAAQGTA QAIGGYYRPN
VELTSQAMRP SATLNAIVDA VA
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