Gene Bamb_2571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2571 
Symbol 
ID4308906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2830616 
End bp2832844 
Gene Length2229 bp 
Protein Length742 aa 
Translation table11 
GC content66% 
IMG OID638150409 
Productisocitrate dehydrogenase, NADP-dependent 
Protein accessionYP_774461 
Protein GI115352622 
COG category[C] Energy production and conversion 
COG ID[COG2838] Monomeric isocitrate dehydrogenase 
TIGRFAM ID[TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.124358 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCACTT CGCCCAAGAT CATCTACACC CTCACCGACG AAGCGCCCGC GCTCGCGACC 
TATTCGCTGC TGCCGATCGT CAAGGCCTTC ACGCGCTCGT CCGGCGTCGC CGTCGAAACG
CGCGACATCT CGCTTGCCGG CCGCATCATC GCGGCATTCG CCGACGTCCT GCCGCCGGAG
CAGAAGGGTT CCGACGATCT GGCCGAACTG GGCCAGCTCA CGCTGAAGTC GGAAGCGAAC
ATCATCAAGC TGCCGAACAT CAGCGCGTCG GTGCCGCAGC TCAAGGCCGC GATCGCCGAA
CTGCAGGCGC AGGGCTACAA GCTGCCGGCG TATCCGGAAG ATCCGACGAC CGACGAAGAA
AAGGCGGTCA AGGCCCGCTA CGACAAGATC AAGGGCAGCG CGGTGAACCC GGTGCTGCGC
GAAGGCAACT CCGATCGCCG CGCGCCGCTG TCGGTGAAGA ACTACGCCCG CAAGCACCCG
CACAAGATGG GCGCATGGAA GGCCACGTCG AAGGCGCACG TCGCGCACAT GAGCGAAGGC
GACTTCTACG GCAGCGAAAA GTCGGCGCTG ATCGCCGCGG CCGGCAGCGT GAAGATCGAA
CTCACGACGA CCGACGGCGT GAAGAAGGTG CTGAAGGAAA AGACGGCCGT GAAGGCCGAT
GAAATCATCG ACGCATCGGT GATGAGCCGC AAGGCGCTGC GCAGCTTCAT CGAAGCGCAG
ATCGCCGACG CGAAGGCGCA GGACGTGCTG TTCTCGGTGC ACCTGAAGGC GACCATGATG
AAGGTCTCGG ACCCGATCCT GTTCGGTCAC TTCGTGTCGG TGTTCTACAG CGACGCGCTC
ACCAAGCACG CGGACGTGCT CGCGAAACTC GGCTTCAACC CGAACAACGG GATCGGCGAC
CTGTACGCGC GCCTGAAGGA CCTGCCGGCC GACACGCGCG AAGCGATCGA AGCCGACGTC
AAGGCTGAAT ACGCGGTGCG CCCGCGTCTC GCGATGGTCA ACTCGGACAA GGGCATCACG
AACCTGCACG TGCCGAGCGA CGTGATCGTC GACGCATCGA TGCCGGCGAT GATTCGCGAC
TCGGGCGGCA TGTGGGGCCC GGACGGCGAA CTGTCCGACG CGAAGGCCGT GATTCCGGAC
CGCTGCTACG CGGGCGTCTA CCAGGCCGTG ATCGAAGACT GCAAGCAGCA CGGCGCATTC
GACCCGGTCA CGATGGGCAG CGTGCCGAAC GTCGGCCTGA TGGCGCAGGC GGCCGAGGAA
TACGGTTCGC ACGACAAGAC GTTCCTGATC CCGACCGATG GCGTCGTGCG CGTCACGGAC
GAAGCCGGCA ACGTGCTGCT CGAGCACGCG GTCGAGTCGG GCGACATCTG GCGCATGTGC
CAGACGAAGG ACGCACCGGT GCAGGACTGG GTCAAGCTCG CGGTGAACCG TGCCCGCGCG
ACCGGCGCGC CGGCCGTGTT CTGGCTCGAT CCGGCCCGTG CGCACGACGC GCAGATCATC
GCGAAGGTCG AACGCTATCT GAAGGATCAC GACACGAACG GCCTCGACAT CCGCATCATG
ACGCCGGTCG ACGCGACGCG TTTCTCGCTC GAGCGCATCC GCGCGGGCAA GGACACGATC
TCGGTCACGG GCAACGTGCT GCGCGACTAC CTGACCGACC TGTTCCCGAT CATGGAACTC
GGCACCAGCG CGAAGATGCT GTCGATCGTG CCGCTGATGG CCGGCGGCGG GATGTTCGAA
ACGGGCGCGG GCGGCTCGGC ACCGAAGCAC GTGCAGCAGT TCGTCGAGGA AGGCTTCCTG
CGCTGGGATT CGCTCGGCGA ATTCCTCGCG CTGGCCGCGT CGCTCGAACA CCTCGGCCAC
GCTTACCAGA ACCCGAAGGC GCTCGTGCTC GCGAAGACGC TCGACCAGGC GACCGGCAAG
TTCCTGGAGG AGAACAAGTC GCCCGCACGC AAGGTCGGCG GCCTCGACAA CCGCGGCAGC
CACTTCTACC TGTGCCTGTA CTGGGCGCAG GCGCTGGCCG AGCAGACCGA TGATGCCGCG
CTGAAGGCGC AGTTCGAAGG CGTCGCGAAG TCGCTGGCCG ACAGCGAAGC GCGCATCCTG
GAAGAACTGT CGGCCGCGCA GGGCACCGCG CAGGCGATCG GCGGCTACTA CCGTCCGAAC
GTCGAGCTGA CGAGCCAGGC GATGCGCCCG AGCGCAACGC TGAACGCCAT CGTCGACGCA
GTCGCCTGA
 
Protein sequence
MSTSPKIIYT LTDEAPALAT YSLLPIVKAF TRSSGVAVET RDISLAGRII AAFADVLPPE 
QKGSDDLAEL GQLTLKSEAN IIKLPNISAS VPQLKAAIAE LQAQGYKLPA YPEDPTTDEE
KAVKARYDKI KGSAVNPVLR EGNSDRRAPL SVKNYARKHP HKMGAWKATS KAHVAHMSEG
DFYGSEKSAL IAAAGSVKIE LTTTDGVKKV LKEKTAVKAD EIIDASVMSR KALRSFIEAQ
IADAKAQDVL FSVHLKATMM KVSDPILFGH FVSVFYSDAL TKHADVLAKL GFNPNNGIGD
LYARLKDLPA DTREAIEADV KAEYAVRPRL AMVNSDKGIT NLHVPSDVIV DASMPAMIRD
SGGMWGPDGE LSDAKAVIPD RCYAGVYQAV IEDCKQHGAF DPVTMGSVPN VGLMAQAAEE
YGSHDKTFLI PTDGVVRVTD EAGNVLLEHA VESGDIWRMC QTKDAPVQDW VKLAVNRARA
TGAPAVFWLD PARAHDAQII AKVERYLKDH DTNGLDIRIM TPVDATRFSL ERIRAGKDTI
SVTGNVLRDY LTDLFPIMEL GTSAKMLSIV PLMAGGGMFE TGAGGSAPKH VQQFVEEGFL
RWDSLGEFLA LAASLEHLGH AYQNPKALVL AKTLDQATGK FLEENKSPAR KVGGLDNRGS
HFYLCLYWAQ ALAEQTDDAA LKAQFEGVAK SLADSEARIL EELSAAQGTA QAIGGYYRPN
VELTSQAMRP SATLNAIVDA VA