Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2566 |
Symbol | |
ID | 4308901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 2824475 |
End bp | 2826775 |
Gene Length | 2301 bp |
Protein Length | 766 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638150404 |
Product | ATP-dependent Clp protease, ATP-binding subunit clpA |
Protein accession | YP_774456 |
Protein GI | 115352617 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0752747 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGCCC AGGAATTGGA AGTCAGCCTG CACATGGCGT TCATGGAAGC ACGCCAGGCG CGCCATGAGT TCATTACGGT CGAGCATCTG CTGCTGGCCC TGCTGGATAA TCCGACGGCA GCCGAGGTGT TGCGCGCGTG TGCGGCCAAC ATCGAGGACT TGCGTCAGAA CCTGCGCAAT TTCATCCACG ACAACACACC GACCGTTCCG GGTACCGACG ATGTCGATAC CCAGCCGACG CTCGGTTTCC AGCGCGTGAT CCAGCGCGCG ATCATGCACG TCCAGTCGAC ATCGAACGGC AAGAAGGAAG TCACCGGCGC GAACGTGCTG GTCGCGATCT TCGGCGAGAA GGATTCGCAC GCCGTCTACT ACCTGCAGCA GCAGGGCGTC ACGCGCCTGG ACGTCGTGAA CTTCATTTCG CACGGCATCG CGAAGACGAA CGGCGGCGAA GCCGCGAAGT CGACCGACGC GAATGCGGAA AGCGAAGACG CGAACGCGCA GAAGGAAACG CCGCTCGCGC AGTTCACGCA GAACCTGAAC CAGATGGCGA AGGACGGCCG CATCGATCCG CTGATCGGCC GCGAGCCGGA GGTCGAGCGC GTCGTGCAGG TGCTGTGCCG GCGCCGCAAG AACAATCCGC TGCTCGTGGG CGAAGCGGGC GTGGGCAAGA CCGCGATCGC GGAAGGGCTC GCCTATCGCA TCACGCGCGG CGAAGTGCCG GACATCCTCG CGAACGCGCA GGTGTATTCG CTCGACATGG GCGCGCTTCT CGCGGGCACC AAGTATCGCG GCGACTTCGA GCAGCGTCTG AAGACGGTGC TGAAGGAGCT GAAGGAGCGT CCGCACGCGA TCCTGTTCAT CGACGAGATC CACACGCTGA TCGGCGCGGG CGCGGCATCG GGCGGCACGC TCGACGCGTC GAACCTGCTG AAGCCGGCGC TGTCGTCGGG CACGCTCAAG TGCATCGGCG CGACCACGTT CACCGAGTAT CGCGGCATCT TCGAGAAGGA CGCGGCGCTG TCGCGGCGCT TCCAGAAGGT CGACGTGACG GAGCCGACCG TCGAGCAGAC GGTCGCGATC CTGCGCGGGC TGAAGTCGCG CTTCGAGGAG CATCACGGCG TCAAGTATTC GTCGGGCGCA CTGTCGGCCG CGGCCGAACT GTCGGCACGC TTCATCACCG ATCGCCACCT GCCGGACAAG GCGATCGACG TGATCGACGA AGCGGGCGCC GCGCAGCGCA TCCTGCCGAA GTCGAAGCAG AAGAAGACGA TCGGCAAGAG CGAGATCGAG GAAATCATCT CGAAGATCGC GCGCGTGCCG GCGCAAAGCG TGTCGCAGGA CGATCGCAGC AAGCTGCAGA CGCTCGATCG CGACCTGAAG AGCGTCGTGT TCGGTCAGGA TCCGGCGATC GATGCGCTCG CCGCATCGAT CAAGATGGCG CGCGCGGGCC TCGGCAAGAT GGACAAGCCG ATCGGCTCGT TCCTGTTCTC CGGCCCGACG GGCGTCGGCA AGACCGAAGT GGCGCGCCAG CTCGCGTTCA CGCTCGGCAT CGAGCTGATC CGTTTCGACA TGTCGGAATA CATGGAGCGT CACGCGGTGA GCCGCCTGAT CGGCGCGCCG CCGGGCTACG TCGGGTTCGA CCAGGGCGGC CTGCTGACCG AAGCCGTCAC GAAGAAGCCG CATTGCGTGC TGTTGCTCGA CGAAATCGAG AAGGCGCATC CGGACATCTT CAACGTGCTG CTGCAGGTGA TGGACCACGG CACGCTGACG GACAACAACG GCCGCAAGGC GGATTTCCGC AACGTCATCA TCATCATGAC GACGAACGCG GGCGCCGAGT CGATGCAGAA GGCAACCATC GGCTTCACGA CACGCCGCGA GACGGGCGAC GAGATGACCG ACATCAAGCG TCTGTTCACG CCGGAGTTCC GCAACCGCCT GGATTCGATC ATCAGCTTCC GCTCGCTCGA TGAGGAAATC ATCATGCGCG TGGTCGACAA GTTCCTGATC CAGCTCGAGG AGCAGCTGCA CGAGAAGAAG GTCGACGCGT TGTTCACCGA TGCGTTGCGC AAGCATCTCG CGAAGCACGG CTTCGACCCG CTGATGGGCG CGCGGCCGAT GCAGCGGCTG ATCCAGGACA CGATCCGTCG TGCGCTGGCC GACGAACTGC TGTTCGGCAA GCTCGTCAAC GGCGGGCACG TGACGGTCGA CGTCGACGAA AACGACAAGG TGCAGTTGTC GTTCGACAAG CTGGCGAATC CGCCGCACAA GCCGAACGAA GAGACGGTCG AAGTCGAGTA A
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Protein sequence | MIAQELEVSL HMAFMEARQA RHEFITVEHL LLALLDNPTA AEVLRACAAN IEDLRQNLRN FIHDNTPTVP GTDDVDTQPT LGFQRVIQRA IMHVQSTSNG KKEVTGANVL VAIFGEKDSH AVYYLQQQGV TRLDVVNFIS HGIAKTNGGE AAKSTDANAE SEDANAQKET PLAQFTQNLN QMAKDGRIDP LIGREPEVER VVQVLCRRRK NNPLLVGEAG VGKTAIAEGL AYRITRGEVP DILANAQVYS LDMGALLAGT KYRGDFEQRL KTVLKELKER PHAILFIDEI HTLIGAGAAS GGTLDASNLL KPALSSGTLK CIGATTFTEY RGIFEKDAAL SRRFQKVDVT EPTVEQTVAI LRGLKSRFEE HHGVKYSSGA LSAAAELSAR FITDRHLPDK AIDVIDEAGA AQRILPKSKQ KKTIGKSEIE EIISKIARVP AQSVSQDDRS KLQTLDRDLK SVVFGQDPAI DALAASIKMA RAGLGKMDKP IGSFLFSGPT GVGKTEVARQ LAFTLGIELI RFDMSEYMER HAVSRLIGAP PGYVGFDQGG LLTEAVTKKP HCVLLLDEIE KAHPDIFNVL LQVMDHGTLT DNNGRKADFR NVIIIMTTNA GAESMQKATI GFTTRRETGD EMTDIKRLFT PEFRNRLDSI ISFRSLDEEI IMRVVDKFLI QLEEQLHEKK VDALFTDALR KHLAKHGFDP LMGARPMQRL IQDTIRRALA DELLFGKLVN GGHVTVDVDE NDKVQLSFDK LANPPHKPNE ETVEVE
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