Gene Bamb_2561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2561 
Symbol 
ID4308896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2819678 
End bp2820889 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content69% 
IMG OID638150399 
Productbifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 
Protein accessionYP_774451 
Protein GI115352612 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase 
TIGRFAM ID[TIGR00148] UbiD family decarboxylases
[TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCACACG CAGAACTCGC TGGAAAACAC CTCGTTCTCG GCCTGACGGG CGGCATCGCC 
TGCTACAAGA TCGCCGAGCT CACCCGGCTG CTGACGAAGG CAGGTGCGAC CGTGCAGGTC
GTGATGACCG AAGCCGCCGC GCAGTTCATC ACGCCCGTCA CGATGCAGGC GCTGTCCGGC
CGGCCCGTCT ATACGAGCCA GTGGGACGCG CGCGTCGACA ACAACATGGC GCACATCGAC
CTGTCGCGCG AAGCCGACGC GATCGTGATC GCGCCCGCGT CGACGGATTT CCTCGCGAAG
CTCGCGCACG GTTTCGCGGA CGACCTGCTG TCGACGCTGT GCGTCGCGCG CGACTGTCCG
CTGCTCGTCG TGCCCGCGAT GAATCGCCAG ATGTGGCAGA ACCCGGCCAC GCAACGCAAT
GCCGCGCAAC TGCGCGCCGA CGGCGTGTCG GTGCTCGGCC CCGATTCGGG CGCGCAGGCC
TGCGGCGAAG TCGGCGACGG CCGCATGCTC GAACCCGACG CGATCTATGA AGCGATCGTC
GCGCACTTCG CACCGAAGGT GCTCGCGCAT CGTCGCGTGC TGATCACGGC CGGACCGACG
TTCGAGCCGC TCGACCCGGT GCGCGGCCTC ACGAACCGCT CGAGCGGCAA GATGGGCTTC
GCGCTCGCGC GCGCCGCGCA GCAGGCCGGC GCCGACGTGC ATCTCGTCGC GGGGCCGGTC
GCGCTCGACA CGCCGTGGGG CGTGACGCGC CAGGACGTGC AGACCGCGCA GCAGATGTAC
GACGCGGTCA TGCATGCGGT AACCGACGCG GACATCTTCA TCGCGGTGGC CGCGGTCGCC
GACTGGCGCG TCGACCAGCC GGCCGAGCAC AAGATGAAGA AGACGGCCGA TCGCAAGATG
CCGGCGCTCG CGTTCGTCGA GAACCCCGAC ATCCTCGCAT CGGTCGCGGC GCTGCCCGAT
CCGCCGTTCT GCGTCGGTTT CGCCGCCGAA AGCGGCGACC TCGACGTGCA CGGCGACGAA
AAGCGCAAGC GCAAGAACGT GCCGCTGCTG GTCGGCAACC TCGGCCCGCT GACGTTCGGC
CGCGACGACA ACGAAGTCGT GCTGTTCGAG GCAGCCGGGC TCACGCGCCT GCCGCGCGCG
CCGAAGGACG AGCTCGCGCA CGCGCTCGTC GCCGAAATCG CGAAGCGCCT GCCCGACAAT
CACCTGATCT GA
 
Protein sequence
MAHAELAGKH LVLGLTGGIA CYKIAELTRL LTKAGATVQV VMTEAAAQFI TPVTMQALSG 
RPVYTSQWDA RVDNNMAHID LSREADAIVI APASTDFLAK LAHGFADDLL STLCVARDCP
LLVVPAMNRQ MWQNPATQRN AAQLRADGVS VLGPDSGAQA CGEVGDGRML EPDAIYEAIV
AHFAPKVLAH RRVLITAGPT FEPLDPVRGL TNRSSGKMGF ALARAAQQAG ADVHLVAGPV
ALDTPWGVTR QDVQTAQQMY DAVMHAVTDA DIFIAVAAVA DWRVDQPAEH KMKKTADRKM
PALAFVENPD ILASVAALPD PPFCVGFAAE SGDLDVHGDE KRKRKNVPLL VGNLGPLTFG
RDDNEVVLFE AAGLTRLPRA PKDELAHALV AEIAKRLPDN HLI