Gene Bamb_2560 details

Gene Information

• Locus tag: Bamb_2560
• Symbol: lspA
• ID: 4308895
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 2819110
• End bp: 2819610
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 638150398
• Product: lipoprotein signal peptidase
• Protein accession: YP_774450
• Protein GI: 115352611
• COG category: [M] Cell wall/membrane/envelope biogenesis; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0597] Lipoprotein signal peptidase
• TIGRFAM ID: [TIGR00077] lipoprotein signal peptidase

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAAAA CCCTGTCGAA ACCGGCCAGC GGCGCGCTCG CACCCTGGCT CGGCATTTCG 
CTGATCGTGA TCCTGTTCGA CCAGCTGTCG AAAATCGCGA TCCTGAAAAC GTTCGCGTAC 
GGCGCGCAGC ATGCGCTGAC GTCGTTCTTC AGCCTCGTGC TGGTGTACAA CCGCGGCGCC 
GCGTTCGGCT TCCTGTCCAC CGCGAGCGGC TGGCAGCGCT GGGCGTTCAC CGCGCTCGGC 
ATCGGCGCGA CGCTCGTGAT CTGCTTCCTG CTGCGCCGCC ATGGCCAGCA GCGGCTGTTC 
AGCCTGTCGC TCGCGCTGAT CCTCGGCGGC GCGCTCGGCA ACGTGATCGA CCGGCTGGTC 
TACGGCCATG TGATCGACTT TCTCGATTTC CACGTCGGCG GCTGGCACTT CCCGGCGTTC 
AACCTCGCCG ATTCCGCGAT CACGATCGGC GCGGTGCTGC TGGTCTACGA CGAACTGCGT 
CGCGTGCGCG GCTCGCGCTG A 

 

Protein sequence

MAKTLSKPAS GALAPWLGIS LIVILFDQLS KIAILKTFAY GAQHALTSFF SLVLVYNRGA 
AFGFLSTASG WQRWAFTALG IGATLVICFL LRRHGQQRLF SLSLALILGG ALGNVIDRLV 
YGHVIDFLDF HVGGWHFPAF NLADSAITIG AVLLVYDELR RVRGSR