Gene Bamb_2559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2559 
SymbolileS 
ID4308894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2816270 
End bp2819107 
Gene Length2838 bp 
Protein Length945 aa 
Translation table11 
GC content66% 
IMG OID638150397 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_774449 
Protein GI115352610 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAACA AGAAAGCCGA TTCGAAACCG CAGGCCAAGT ATCCGGTCAA CCTGCTCGAC 
ACGCCGTTCC CGATGCGCGG CGACCTGCCC AAGCGTGAGC CGCAGTGGGT CAAGGAATGG
GAAGAGCGCG GCATCTACGA AAAGATCCGC GCGGCCAGCA AGGGCCGCCC GAAGTTCATC
CTGCACGACG GCCCGCCGTA TGCGAACGGT GACATCCACC TCGGTCACGC GGTCAACAAG
ATCCTGAAGG ACATCGTCGT CAAGTCGCGC AACATGGCCG GCTTCGACGC ACCGTACGTG
CCGGGCTGGG ATTGCCACGG GATGCCGATC GAGATCCAGA TCGAGAAGCA GTTCGGCAAG
TCGCTGCCGG CGGCCGAAGT GATGAGCAAG GCGCGCGCGT ATGCGACCGA GCAGATCGAG
AAGCAGAAGG TCGGCTTCAA GCGCCTCGGC GTGCTCGGCG ACTGGGCGAA TCCGTACAAG
ACGATGAACT TCGTCAACGA GGCGGAAGAG ATCCGCGCGC TCGGCAAGAT CATCGAGAAG
GGCTACGTGT ACCGCGGGCT GAAGCCGGTG AACTGGTGCT TCGACTGCGG CTCGGCGCTC
GCCGAGGCGG AAGTCGAGTA CAAGGACCGC ACCGACCCGA CGATCGACGT GATGTTCGCG
TTCGCCGAGC CGGAAAAGAC CGCGCAGGCG TTCGGCCTGC CGGCGCTGCC GCGCGCCGAG
GGCGGCATCG TGATCTGGAC CACCACGCCG TGGACGATCC CGGCCAACCA GGCGCTGAAC
CTCCATCCGG AAATCGTCTA CGCGCTGGTC GACACCGAGC GCGGGCTGCT GATCATCGCG
GAAGAACGCG TCGCGGCCTG CATGGCCGAC TTCAAGCTGA CCGGCCGCGT CGTCGCGACC
GCGCCCGGCG TGAAGCTCGC GAACCTGCGC TTCCACCATC CGCTCGCGTC GGCCCATCCC
GGCTACAAGC GCACCGCGCC CGTCTACCTC GGCGACTACG TGACGACCGA CACGGGTACC
GGCGTCGTGC ACTCGTCGCC CGCCTACGGC ATCGAAGACT TCATGTCGTG CAAGGCGCAC
GGGATGACCG ATTCGGACTT CATCAACCCG GTGATGGGCG ACGGCCGCTA CATCGAATCG
CTGCCGCTGT TCGGCGGCCT GTCGATCTGG GACGCGAACC CGAAGATCGT CGACGCGCTG
AACGCGGCCG GCTCGCTGCT GCGCAGCGAG AAGTACACGC ACAGCTACAT GCACTGCTGG
CGCCACAAGA CGCCGATCAT CTACCGCGCG ACGTCGCAAT GGTTCGCCGG CATGGACGTG
ACGCCGCGCG ACGACGGCAA GACGCTGCGC GAAGCGGCGC TCGAAGGCGT CGAGGCGACC
GCGTTCTACC CGTCGTGGGG CAAGCAGCGC CTGTTCAGCA TGATCGCGAA CCGTCCCGAC
TGGACGCTGT CGCGTCAGCG CCAATGGGGC GTGCCGATGG CGTTCTTCGT GCACAAGGAA
ACCGGCGAGC TGCACCCGCG CACGCTCGAG CTGCTCGAGG AAGTCGCCAA GCGCGTCGAG
CAGTCGGGCA TCGAGGCGTG GCAGTCGCTC GATCCGCGCG AGCTGATCGG CGACGACGCG
AACATGTACG AAAAGAACCG CGACACGCTC GACGTGTGGT TCGACTCGGG CACGACGCAC
TGGCACGTGC TGCGCGGCTC GCACAAGGAT CAGCTGCAGT TCCCGGCCGA TCTATACCTC
GAAGGCTCGG ACCAGCACCG CGGCTGGTTC CACTCGTCGC TGCTGACCGC GTCGATGATC
GACGGCCGCG CGCCGTACAA GGGCCTGCTC ACGCACGGCT TCACGGTCGA CGGCGAAGGC
CGCAAGATGA GCAAGTCGCT CGGCAACGGT GTCGACCCGC ATGAAGTCGC GAACCGCCTC
GGCGCGGAAA TCATCCGCCT GTGGATCGCG TCGACCGACT ATTCGGGCGA GCTCGCGATC
TCCGAGGAAA TCCTGAAGCG TGTGACGGAA GGCTATCGCC GCATCCGCAA CACGCTGCGC
TTCCTGCTCG CGAACCTGTC GGACTTCGAC TTCGCGCAGC ACGCGGTGCC GGTCGACGAA
TGGCTCGAGA TCGACCGTTA TGCGGTCGCG TTCTCCGCGC AACTGCAGAC GGAATTGCTC
GGCCACTACG AGAAGTACGA GTTCCACCCG GTCGTCGCGA AGCTGCAGAC GTACTGCTCG
GAAGATCTCG GCGGCTTCTA CCTCGACGTG CTGAAGGACC GCCTGTACAC CAGCGCGGCC
GATTCGCGCG CGCGCCGCTC CGCGCAGACC GCGCTGTACC ACCTGACGCA CGGGCTGCTG
CGCGTGCTCG CACCGTTCCT GTCGTTCACC GCGGAAGAAG CGTGGAAGGT GTTCCAGCCG
GCCAGCGACA CCGTGTTCAC CGAAACCTAC TACGCGTATC CGGAAGTGGC CGGCTCGGCC
GCACTGATCG AGAAGTGGGC GCTGCTGCGC GACGTGCGCG GCAACGTGAC GAAGGCGCTC
GAGGAAGCAC GCACCGCGAA CCGCATCGGT TCGTCGCTGC AGGCCGAAGT GGCCGTGCAC
GCGAGCGGCG CGCGCTACGA TGCGCTCACG AGCCTCGGCG ACGATCTGAA GTTCGTGCTG
ATCACGTCGG CGGCGACGGT CGTGAAGGTC GACGACGAGG CGCAGGAAAG CGTCGACGTC
GCGGCGTCGA AGTACCAGAA GTGCGAACGC TGCTGGCACT ACCGCGAGGA CGTCGGCGCG
CACGCCGATC ATCCGACGCT GTGCGGACGC TGCTTCTCGA ACCTGTTTGA AAACGGCGAA
ATCCGGAGCG CGGCTTAA
 
Protein sequence
MSNKKADSKP QAKYPVNLLD TPFPMRGDLP KREPQWVKEW EERGIYEKIR AASKGRPKFI 
LHDGPPYANG DIHLGHAVNK ILKDIVVKSR NMAGFDAPYV PGWDCHGMPI EIQIEKQFGK
SLPAAEVMSK ARAYATEQIE KQKVGFKRLG VLGDWANPYK TMNFVNEAEE IRALGKIIEK
GYVYRGLKPV NWCFDCGSAL AEAEVEYKDR TDPTIDVMFA FAEPEKTAQA FGLPALPRAE
GGIVIWTTTP WTIPANQALN LHPEIVYALV DTERGLLIIA EERVAACMAD FKLTGRVVAT
APGVKLANLR FHHPLASAHP GYKRTAPVYL GDYVTTDTGT GVVHSSPAYG IEDFMSCKAH
GMTDSDFINP VMGDGRYIES LPLFGGLSIW DANPKIVDAL NAAGSLLRSE KYTHSYMHCW
RHKTPIIYRA TSQWFAGMDV TPRDDGKTLR EAALEGVEAT AFYPSWGKQR LFSMIANRPD
WTLSRQRQWG VPMAFFVHKE TGELHPRTLE LLEEVAKRVE QSGIEAWQSL DPRELIGDDA
NMYEKNRDTL DVWFDSGTTH WHVLRGSHKD QLQFPADLYL EGSDQHRGWF HSSLLTASMI
DGRAPYKGLL THGFTVDGEG RKMSKSLGNG VDPHEVANRL GAEIIRLWIA STDYSGELAI
SEEILKRVTE GYRRIRNTLR FLLANLSDFD FAQHAVPVDE WLEIDRYAVA FSAQLQTELL
GHYEKYEFHP VVAKLQTYCS EDLGGFYLDV LKDRLYTSAA DSRARRSAQT ALYHLTHGLL
RVLAPFLSFT AEEAWKVFQP ASDTVFTETY YAYPEVAGSA ALIEKWALLR DVRGNVTKAL
EEARTANRIG SSLQAEVAVH ASGARYDALT SLGDDLKFVL ITSAATVVKV DDEAQESVDV
AASKYQKCER CWHYREDVGA HADHPTLCGR CFSNLFENGE IRSAA