| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2555 |
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| Symbol | |
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| ID | 4308890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 2811729 |
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| End bp | 2813111 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638150393 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_774445 |
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| Protein GI | 115352606 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGAGTC TGCAAAGCCG CCTGCTGTCG CGCCGGCTGG CCTTGGTGAT TCGCGATTTC
CACCAGCCGG TGATGATCTG GCAGGCGGCG ATCCTCGTCG GCGCACTCTG TTTTGCGTGG
CTGGCCGCGC GCTTCGTGCA CGGCCGGATC GATGCGCGCC GCACGGCGTC CGGACGCGCG
CCCGGTGCGG GCTCGGATAG CCTGAAGCGC GCGCTGTTCC CCTTGTTCGG CGGCATTTTC
GTCGGCGTCG CGCAGCTCGC GTTCGAGCCG TTCATGTCGA CGTCGCTGCT GTCGCTCGCC
CTCGTGCCGC TGTTCGGCAT CGGGCTGATC TACGTGCTGT TCTTCTGCGC GCGGCGCGTG
TTCGCGCGCG ACGGCCACAC GCATGCGTGG CTGTCGATCG TCGAGAAGAT CGTGTCGACC
ATCGTGTGGG CCGCGATGGT GCTGACCGTG CTCGGCATCC AGCGCGACGT GCTCGGCTGG
CTCGACAGCG TGCAGTTCCG CGTGGCCAAT GCGCATCTCA CGCTGCTGTC GGTGATCTCC
GGCGCGCTGT GGGTGTGCGT GACGCTGATG GTCGCGATGT GGCTCGGGTC GGTGCTCGAG
GATCGCCTCG CACGCGCGAG CACGCTCGAC GCGAACCTGA AGGTCGTGCT GTCGCGGGTC
GGCCGCGCGC TGCTGGTGTT CGCGGCGGTC CTGATCGGGC TGTCGCTCGT CGGCATCGAC
GTGACGGTGC TCGGCGTGTT CGGTGGCGCG TTGGGCGTCG GCCTCGGCTT CGGCCTGCAG
AAGGTCGCCA GCAATTACGT GTCGGGCTTC ATCATCCTGC TCGATCGCTC GCTGCGGCTC
GGCGACGCGA TCAGCGTCGG CGGGCTGCAG GGCGTCGTCA CGCAGATCCG CACGCGCTAT
ACGGTCGTGC GCGGCCTCGA CGGCAACGAG ACGCTGATCC CGAACGAGAA GCTGATCACC
GACGTCGTGC AGAACCAGTC GTCGTACCTG ACGCGCGGCT ACGCGAAGGT CGCCGTGCAG
ATCGCCTATA CGAACGACGT CGAGCAGGCA CTGGCGGTGC TGGCGGAAGC CGCGAAGGGC
GTGCCGCGCG TGCTCGCGGA GCCGGCGCCG GCCCCGTACC TGGTCGGCTT CGGCGCGGAC
GGGATCGATC TGGAGCTCGG TTTCTGGATC GAGGATGCGG CGACGGGCAC GTCGGGCGTG
CGTTCGGCCG TGAACCGCAA CATCTGGCGG CTGTTCGGCG AGCACGGGAT TTCGATCCCG
TTCCCGCAAC GAGAAGTGCG CGTGGTCGGC CTGCCGGACG GTCTAGCGGC GACCGGCGTG
GTGGCGAAGG GCTTGCCCGT GGCGGGCGTC GGGACGGTGG ACGGGCAGGC GTCGGCGGCC
TAG
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| Protein sequence | MESLQSRLLS RRLALVIRDF HQPVMIWQAA ILVGALCFAW LAARFVHGRI DARRTASGRA
PGAGSDSLKR ALFPLFGGIF VGVAQLAFEP FMSTSLLSLA LVPLFGIGLI YVLFFCARRV
FARDGHTHAW LSIVEKIVST IVWAAMVLTV LGIQRDVLGW LDSVQFRVAN AHLTLLSVIS
GALWVCVTLM VAMWLGSVLE DRLARASTLD ANLKVVLSRV GRALLVFAAV LIGLSLVGID
VTVLGVFGGA LGVGLGFGLQ KVASNYVSGF IILLDRSLRL GDAISVGGLQ GVVTQIRTRY
TVVRGLDGNE TLIPNEKLIT DVVQNQSSYL TRGYAKVAVQ IAYTNDVEQA LAVLAEAAKG
VPRVLAEPAP APYLVGFGAD GIDLELGFWI EDAATGTSGV RSAVNRNIWR LFGEHGISIP
FPQREVRVVG LPDGLAATGV VAKGLPVAGV GTVDGQASAA
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