| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2534 |
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| Symbol | |
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| ID | 4310160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 2791983 |
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| End bp | 2792699 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638150372 |
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| Product | pseudouridine synthase, Rsu |
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| Protein accession | YP_774424 |
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| Protein GI | 115352585 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCTCG AAAGCATTCT CTACACGCAG GGCTTCGGCT CGCGCCGCCA GTGCCGCGGC
CTGATCGAAA CGGGCCGCGT CACCGTCGCG GGCGCGAGCG CGACCGACCC CGACGCGTCG
TTCGACACCG ACGGCCTCGT CTTCACGGTC GACGACACCG CCTGGCCGTT CCACGCCCGC
GCGTATCTGG CGCTCAACAA GCCGGCCGGC TACGAGTGTT CGCGCGACCC GCAACACCAC
GCGAGCGTGT TCAGCCTGCT GCCCGCGCCG CTCGTCGCAC GCGGCGTGCA GTGTGTCGGC
CGTCTGGACC AGGACACGAC GGGCTTGCTG CTGCTGTCCG ACGACGGCCA GTTCGTGCAC
GCGTACACGT CGCCCAAGCG CAAGGTGCCG AAGACCTACG TCGCGACCGT GCGCCATCCG
CTCGACGACA CCCAGCTGAA CGCGCTGCGC GCCGGCGTGC AGCTCCACGG CGAGCCGAAG
CCGATCGCGG CGGTCGCCGC CCACGCGCGC GACACGCACG CGCTCGCGCT GACCGTCCTC
GAAGGCAAAT ACCATCAGGT GAAACGCATG GTCGCGGCGG CCAGCAACCG CGTCGAGGCG
CTGCACCGCG AAAGCATCGG CGGCTTCACG CTGCCGGAGG ATCTCGCGCC CGGCGCGTGG
CGCTGGCTCG GGGAACGCGA GCTGTCGGCG CTGCGCGATC CCGTCAAAAC CCTCTAA
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| Protein sequence | MDLESILYTQ GFGSRRQCRG LIETGRVTVA GASATDPDAS FDTDGLVFTV DDTAWPFHAR
AYLALNKPAG YECSRDPQHH ASVFSLLPAP LVARGVQCVG RLDQDTTGLL LLSDDGQFVH
AYTSPKRKVP KTYVATVRHP LDDTQLNALR AGVQLHGEPK PIAAVAAHAR DTHALALTVL
EGKYHQVKRM VAAASNRVEA LHRESIGGFT LPEDLAPGAW RWLGERELSA LRDPVKTL
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