| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2510 |
|---|
| Symbol | |
|---|
| ID | 4310136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 2767016 |
|---|
| End bp | 2767933 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 638150347 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_774400 |
|---|
| Protein GI | 115352561 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAGC CCACGCCCGA CCTGCGCCAG TGGCGCTATT TCGTGACCGT TGCCGACGAG
CGCCACTTCG GCCGCGCGGC CGAGCGCCTG TCGATGACGC AGCCGCCGCT GTCGCAGGCG
ATCCGGGCGC TCGAGGAGGC GCTCGGCGTC GCGCTGTTCG TGCGTACCAA GCGCTCGGTC
GCGCTGACGG CGGTCGGCGC GGCGCTGCTG CCCGACGTGC GCCGGCTGCT CGCGTCGGCC
GACGCGCTGC CGCCGCTTGC GCGGCGCCTC GCGCGCGGCG AAGCCGGTTC GCTGTCGCTC
GCGTTCGTGT CGACCGCCGA TTACGGGCTG CTGCCGTCGC TGCTGCGCGC GTTCGGCGCG
CGCTATCCGC AGGTGCGGCT GCAGCTCGCG GAGGCGACGA GCGACGTGCA GATCGACGAA
CTCGTCGCGG GACGCATCGA CGCGGGGCTC GTGATTCCGC CGGTGCCGCC GCGCCACGCG
GCCGGGCTGT CGTACCTGCC GGTCGTGCGC GAGCCGCTGG TGGTCGCGAT GCCGGCGGCC
GCGGCGCCCG ATGGGCCAGA GGACGAGCCC GTGCATCTGG CCGACCTGGC CGCGCTGCCG
CTCGTGATCT TCCCGCGTCG TTTGGCGCCC GGCTTTTATG ACATCATTAC GGGCTGCTAC
GGCGCGGCGG GGGAAACCCC GCACATCGGC CAGGAGGCGA TCCAGATGCA GACGATCGTC
AGCCTCGTGT CGGCCGGCAT GGGCGTCGCA CTGGTGCCGC AATCGCTGCG TAACCTCCGG
CGCACCGGCG TGGTCTACCG GCCGCTCGCC GGCGACGCGC CGGTCGTCGA GACGGGCCTC
GTGTGGCGCA CGGGCGATGT CAGTCCCGTG CTTGCCGGCT TCATCGACGT CGTGCGCGCG
CACGGTCTCG CCACGTGA
|
|---|
| Protein sequence | MAEPTPDLRQ WRYFVTVADE RHFGRAAERL SMTQPPLSQA IRALEEALGV ALFVRTKRSV
ALTAVGAALL PDVRRLLASA DALPPLARRL ARGEAGSLSL AFVSTADYGL LPSLLRAFGA
RYPQVRLQLA EATSDVQIDE LVAGRIDAGL VIPPVPPRHA AGLSYLPVVR EPLVVAMPAA
AAPDGPEDEP VHLADLAALP LVIFPRRLAP GFYDIITGCY GAAGETPHIG QEAIQMQTIV
SLVSAGMGVA LVPQSLRNLR RTGVVYRPLA GDAPVVETGL VWRTGDVSPV LAGFIDVVRA
HGLAT
|
|---|
| |