| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2498 |
|---|
| Symbol | |
|---|
| ID | 4310124 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 2756903 |
|---|
| End bp | 2757835 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 638150335 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_774388 |
|---|
| Protein GI | 115352549 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.904872 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCTC GCTTGTCGCG CCTGTTGCGA CCGCTGCCGC CGCTCGCGAT GCTGGTCGCG
CTCGCGCTCG CGCACGCGCC CGTCGCTCAC GCCGACGTCA CGGCCCGCGA CGATGCCGGC
AATACCGTCA CGCTGCCCGC CCCGGCCCAG CGCGTGATCA GTCTCGCGCC GCATGCGACC
GAGCTGGTCT ACGCGGCCGG CGGCGGCGCG AAGCTGGTCG GCACGGTCAC GTACAGCGAC
TACCCGCCCG CCGCGCAGGC CGTGCCGCGC GTCGGCGACA ACAAGGCCCT CGACCTCGAG
CGGATCGCCG CGCTGAAGCC GGACCTGATC GTCGTCTGGC GGCACGGCAA CGCCGAACGG
CAGACCGATG CGCTGCGGGC GCTGCACATC CCGCTGTTCT TCAGCGAACC GAAACATCTC
CACGACGTGG CGACGTCCCT GCGCCAGCTC GGTACGCTGC TCGGCACGGC ACCCGTCGCC
GACGCGGCCG CGGCATCGTT CTCGCGCGAC ATCGCGGCGC TGCGCGCACG CTACGCGGCG
CGCGCGCCCG TCACGATGTT CTTCCAGGTA TGGGACCGGC CGCTGACGAC GCTCAACGGC
GCGCACCTGT TCAACGAAGT CATTGCGCTA TGCGGCGGCC GCAACGTGTT CGCGGCGCTG
AAGCCGCTCG CGCCGAGCGT CACCGACGAG GCCGTGCTCG CGGCCAATCC GGAAGCGATC
GTGACGACGA GCGCCGGCGC GACGCGCTCG GACGCGCCGC TGCCGAGCCT CGCGCGCTGG
CGTGCATGGC CCGCGCTGAC GGCCGTGGCG CGCAACAACC TGTTCGCGAT CGACGGCGAT
CTGCTGACCC GGCCGTCACC GCGGATCGCG CAAGGCGCGG CCGCGCTGTG CGAGGATCTC
GACGCGGCGC GGGCGCGGCG GCCGGCGCGC TGA
|
|---|
| Protein sequence | MNARLSRLLR PLPPLAMLVA LALAHAPVAH ADVTARDDAG NTVTLPAPAQ RVISLAPHAT
ELVYAAGGGA KLVGTVTYSD YPPAAQAVPR VGDNKALDLE RIAALKPDLI VVWRHGNAER
QTDALRALHI PLFFSEPKHL HDVATSLRQL GTLLGTAPVA DAAAASFSRD IAALRARYAA
RAPVTMFFQV WDRPLTTLNG AHLFNEVIAL CGGRNVFAAL KPLAPSVTDE AVLAANPEAI
VTTSAGATRS DAPLPSLARW RAWPALTAVA RNNLFAIDGD LLTRPSPRIA QGAAALCEDL
DAARARRPAR
|
|---|
| |