Gene Bamb_2497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2497 
Symbol 
ID4310123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2755887 
End bp2756906 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content72% 
IMG OID638150334 
Productputative threonine-phosphate decarboxylase 
Protein accessionYP_774387 
Protein GI115352548 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 
TIGRFAM ID[TIGR01140] L-threonine-O-3-phosphate decarboxylase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGACG CACGCATCCC GCACGGCGGC AACCTGCACG AAGCCGCGCG CCGCCACGGC 
ATTCCGCACG ACGACTGGCT CGACCTGTCG ACCGGCATCA ATCCGATCGG GTATCCGGTG
CCGCCGGTCC CGGCCGACGC CTGGCGCCGG CTGCCCGACG ACGGCGATGC GCTCGCCGCG
TGCGCGGCCG GCTACTATCA CGCACCCGAT GCCGCGCACG TGCTGCCGGT CGCCGGCAGC
CAGGCCGCGA TCCGCGCGTT GCCCGCGCTG CTGCCAATCG GCGACGCCGG CGTCGCGGCG
CTCGCGTATG GCGAATACGC GCCGGCCTTC GCCCGCCACG GCCATCGCGT CGTGCCGCTC
GACATCGACG CGAACGTGTT GCCTGCAACG GTGCGTCACG TCATCGTCGG GAATCCGAAT
AATCCGACCG CCGAATGCGT GCCGGTCGAG CGGCTGCTCG GCTGGCATGC GCAGCTGTCG
GCACGCGGCG GCACGCTGAT CGTCGACGAG GCCTTCGCGG ATACGGGCGC TACGCCCTCG
CTCGCGCAGT ACACCGATCG CCAGGGTCTC GTCGTGCTGC GCTCGGTCGG CAAGTTCTTC
GGGCTCGCCG GCATTCGCGC GGGCTTCGTG CTCGCGCATC CCGACCTGAT CGCCGCGCTG
CGCGACGTGC TCGGCGCATG GACCGTCAGC GGCCCTGCGC GTCATGCAGT GACCGCCGCG
TTCGCCGATC GCGCATGGCA GGCGGCCGCG CGCGAACGGC TCGCGACCGA CGGCGAACGA
CTCGCCACGC TGTTGCGCAT GCACGGCTTC GCGGTGCACG CGACACCGCT CTTCAGCTGG
ACCGACGACC CGCGCGCCAG CCCGTTGCAT GCGGCGCTCG CCGCGCGCGG AATCTGGACG
CGGTACTTCG CGCAACCGTC GAGCGTGCGC GTCGGCCTGC CGGGCTGCGA AGCCGAATGG
CGGCGGCTCG CCGGTGCGCT CGCGGAGTGC GTCCCGATGC TGCAACAGGT ATCCGCATGA
 
Protein sequence
MSDARIPHGG NLHEAARRHG IPHDDWLDLS TGINPIGYPV PPVPADAWRR LPDDGDALAA 
CAAGYYHAPD AAHVLPVAGS QAAIRALPAL LPIGDAGVAA LAYGEYAPAF ARHGHRVVPL
DIDANVLPAT VRHVIVGNPN NPTAECVPVE RLLGWHAQLS ARGGTLIVDE AFADTGATPS
LAQYTDRQGL VVLRSVGKFF GLAGIRAGFV LAHPDLIAAL RDVLGAWTVS GPARHAVTAA
FADRAWQAAA RERLATDGER LATLLRMHGF AVHATPLFSW TDDPRASPLH AALAARGIWT
RYFAQPSSVR VGLPGCEAEW RRLAGALAEC VPMLQQVSA