| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2479 |
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| Symbol | |
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| ID | 4308866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 2733710 |
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| End bp | 2735989 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638150316 |
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| Product | lysine decarboxylase |
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| Protein accession | YP_774369 |
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| Protein GI | 115352530 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.506785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTTC GTTTTCCCGT CGTCATCATC GACGAAGATT TCCGCTCCGA GAACATCTCG
GGCTCCGGCA TCCGGGCGTT GGCCGAAGCG ATCGAGAAGG AGGGCGTCGA AGTCCTCGGC
CTCACGAGCT ACGGCGATCT GACGTCGTTC GCGCAGCAGT CGAGCCGCGC GTCGTGCTTC
ATCCTGTCGA TCGACGACGA CGAACTCATG CTCGGCGAAA CGGGCGCGGA CGGCGAGCTG
CCCGAGCTGG CGACCGCGAT CATCGAGCTG CGCGCGTTCG TCACCGAAGT GCGCCGCCGC
AATGCGGACA TCCCGATCTT CCTGTACGGC GAGACGCGCA CGTCGCGGCA TCTGCCGAAC
GACATCCTGC GCGAGCTGCA CGGCTTCATC CACATGTTCG AGGACACGCC GGAGTTCGTC
GCGCGCCACA TCATTCGCGA GGCGAAGGTC TATCTCGACT CGCTCGCGCC GCCGTTCTTC
AAGGAGCTGG TCAAGTACGC GGACGAAGGC TCGTACTCGT GGCACTGCCC GGGCCACTCG
GGCGGTGTCG CGTTCCTGAA GAACCCGCTC GGTCAGATGT TCCACCAGTT CTTCGGCGAG
AACATGCTGC GCGCGGACGT CTGCAACGCG GTCGACGAAC TCGGCCAGCT GCTCGACCAC
ACGGGCCCGG TCGCGGCATC CGAGCGCAAC GCGGCGCGCA TCTTCAGCGC GGATCACCTG
TTCTTCGTAA CCAACGGCAC GTCGACGTCG AACAAGATCG TCTGGCACGC GACGGTCGCG
CCCGGCGATA TCGTGCTGGT CGACCGCAAC TGCCACAAGT CGATCCTGCA CGCGATCACG
ATGACGGGTG CGATTCCGGT GTTCCTCACG CCGACGCGCA ACCATTTCGG GATCATCGGG
CCGATTCCGC GCGACGAATT CAAGCCGGAG AACATTCGCA AGAAGATCGA GGCGAACCCG
TTCGCACGCG AAGCGCTGCG CGAGAACCCT GACCTCAAGC CGCGCATCCT GACGATCACG
CAGAGCACGT ACGACGGCGT CGTCTACAAC GTCGAGATGA TCAAGGACCT GCTCGGCGAC
CTGCTCGACA CGCTGCACTT CGACGAAGCG TGGCTGCCGC ATGCGACGTT CCACGACTTC
TACCGCGACA TGCATGCGAT CGGCGACGGC CGTCCGCGCA CGGGCGCGCT TGTGTTCGCG
ACGCACTCGA CGCACAAGCT GCTCGCGGGC ATCTCGCAGG CGTCGCAGAT CGTCGTGCAG
GATTCCGAGA ACCGCACGTT CGACAAGCAC CGCTTCAACG AGGCGTACCT GATGCACACG
TCGACGAGCC CGCAGTACGC GATCATCGCG TCGTGCGACG TCGCGGCCGC GATGATGGAG
CCGCCGGGCG GCACCGCGCT CGTCGAGGAG TCGATCGCTG AGGCGATCGA CTTCCGCCGC
GCGATGCGCA AGGTCGACGC CGAATACGGC GACGACTGGT TCTTCAGCGT GTGGGGCCCG
GACGACCTGT CGGAAGAAGG CATCGGTTCG CGCGAGGACT GGATGCTGAA GCCGAACGAC
CACTGGCACG GCTTCGGCCC GCTGGCGGAA GGCTTCAACA TGCTCGACCC GATCAAGGCG
ACGATCATCA CGCCGGGGCT CGACGTCGAC GGCGAGTTCG GCGAGACGGG CATTCCGGCC
GCGATCGTCA CGAAGTACCT GGCCGAGCAC GGGATCATCG TCGAGAAGAC CGGCCTGTAC
TCGTTCTTCA TCATGTTCAC GATCGGCATC ACGAAGGGCC GCTGGAACTC GATGGTGACC
GAGCTGCAGC AGTTCAAGGA CGACTACGAC AACAACCAGC CGCTGTGGCG CGTGCTGCCG
GAATTCGTCG CGCAGCATCC GCGCTACGAG CGCGTCGGCC TGCGCGACCT GTGCACGCAG
ATCCACGACG TGTACCGTGC GAACGACATC GCGCGCCTGA CGACGGAGAT GTACCTGTCG
GACATGGAGC CGGCGCTGAA GCCGTCGGAC GCGTTCGCGA AGCTCGCGCA CCGCAAGATC
GATCGCGTGC CGCTCGACGA GCTCGAAGGC CGCGTGACGA GCATCCTGCT GACGCCGTAC
CCGCCGGGCA TTCCGCTGCT GATTCCGGGC GAGCGCTTCA ACAAGACGAT CGTGAACTAC
CTGCGGTTCG CGCGCGACTT CAACGAACGC TTCCCGGGCT TCCATACCGA CATCCACGGC
CTCGTCGCGG AAGAAATGAA CGGTCGCGTC GAGTACTTCG TCGACTGCGT GCGCGACTGA
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| Protein sequence | MKFRFPVVII DEDFRSENIS GSGIRALAEA IEKEGVEVLG LTSYGDLTSF AQQSSRASCF
ILSIDDDELM LGETGADGEL PELATAIIEL RAFVTEVRRR NADIPIFLYG ETRTSRHLPN
DILRELHGFI HMFEDTPEFV ARHIIREAKV YLDSLAPPFF KELVKYADEG SYSWHCPGHS
GGVAFLKNPL GQMFHQFFGE NMLRADVCNA VDELGQLLDH TGPVAASERN AARIFSADHL
FFVTNGTSTS NKIVWHATVA PGDIVLVDRN CHKSILHAIT MTGAIPVFLT PTRNHFGIIG
PIPRDEFKPE NIRKKIEANP FAREALRENP DLKPRILTIT QSTYDGVVYN VEMIKDLLGD
LLDTLHFDEA WLPHATFHDF YRDMHAIGDG RPRTGALVFA THSTHKLLAG ISQASQIVVQ
DSENRTFDKH RFNEAYLMHT STSPQYAIIA SCDVAAAMME PPGGTALVEE SIAEAIDFRR
AMRKVDAEYG DDWFFSVWGP DDLSEEGIGS REDWMLKPND HWHGFGPLAE GFNMLDPIKA
TIITPGLDVD GEFGETGIPA AIVTKYLAEH GIIVEKTGLY SFFIMFTIGI TKGRWNSMVT
ELQQFKDDYD NNQPLWRVLP EFVAQHPRYE RVGLRDLCTQ IHDVYRANDI ARLTTEMYLS
DMEPALKPSD AFAKLAHRKI DRVPLDELEG RVTSILLTPY PPGIPLLIPG ERFNKTIVNY
LRFARDFNER FPGFHTDIHG LVAEEMNGRV EYFVDCVRD
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