Gene Bamb_2472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2472 
Symbol 
ID4308859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2725397 
End bp2726392 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content67% 
IMG OID638150309 
Productspore coat U domain-containing protein 
Protein accessionYP_774362 
Protein GI115352523 
COG category[S] Function unknown 
COG ID[COG5430] Uncharacterized secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.169797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGATG ACGAATTCGA CACGACGCGA CGCTGGATCC GCGCGCTAGC GTGCGTGCTG 
CTGGCCGCGC TGCTCGGCAT GCCGTGGATG CCGGCTCGAG CGGACACGTG TTCCGTGACG
CCGCCGGCGC CGAGCTTCGG CTCGGTCAGT CCGATCACGC TGCAGGCTTA TACGACGAAC
AGCACGATGA CGGTCAGTTG CACGTGGGAC GCACTGAGTC TGAACACCGG CGTGCTCGTT
TGCGTGAACC TCGGCGGCAC GAGCCCGCGC TACCTGACTA ACGGGACGAA CCAGATGCAG
TACGACCTGT ATCAGGACGC CGGCTATTCG CAACCGTGGG GCGCCGTCAG TGCCGGCACG
ACGCCGATCT CCGTGTCGTT GACGAAACCT GTGCTCGGCA CGACCGCGAG TACCAACGTG
ACCATCTATG GCCGCATCGC GTCGAACCAG CCGACCGTGC CGACCGTGAA CAATGCCAGC
ACCGTCTATA CGCAAAGTTT CGCCGGCAAC CAGGCCGCCT ACAGCTTCAG TTTTTCGCTG
CTCGGCGTGC AGCCCACGCC GTGCGTGTCG CAGTCGACGG CCGGCACGAT GAGCTTTGCC
GCTACCGCCA CCGTCATCAA CAACTGCATC ATCAGCGCGA CCGGCGTCGC GTTTCCGGCG
GCGGGCGTGC TGACGTCGGC GCTGAGCGCG AGCGGCTCGA TCAGTGCGCG CTGCACGAAC
GGCGATGCGT TCCAGATCGC GTTGAACGGC GGGGTCAGCG GCAGTGTCGT CGCACGCACG
ATGCAGCGCA CGGGCGGCGG CTCGGTCAGC TATCAGCTCT ATCAGGACAG CGGCCACACG
CAGCCGTGGG GCGACGGCAC CGGCGGCACG TCGATGGCGA CGGGCACCGG CAGCGGGTTC
GCGCAGGCGA TCACCGTGTA TGGCCGCGTC CCCGCGCAGG CGACGCCGGC GCCCGGCAAC
TACAGCGACA CCATCACCGC GACGATCAGC TTCTGA
 
Protein sequence
MADDEFDTTR RWIRALACVL LAALLGMPWM PARADTCSVT PPAPSFGSVS PITLQAYTTN 
STMTVSCTWD ALSLNTGVLV CVNLGGTSPR YLTNGTNQMQ YDLYQDAGYS QPWGAVSAGT
TPISVSLTKP VLGTTASTNV TIYGRIASNQ PTVPTVNNAS TVYTQSFAGN QAAYSFSFSL
LGVQPTPCVS QSTAGTMSFA ATATVINNCI ISATGVAFPA AGVLTSALSA SGSISARCTN
GDAFQIALNG GVSGSVVART MQRTGGGSVS YQLYQDSGHT QPWGDGTGGT SMATGTGSGF
AQAITVYGRV PAQATPAPGN YSDTITATIS F