| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2471 |
|---|
| Symbol | |
|---|
| ID | 4308858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 2724581 |
|---|
| End bp | 2725390 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 638150308 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_774361 |
|---|
| Protein GI | 115352522 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.214678 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAGC CGTCCTCCGC CCCCACCCCG CCGCTCGACG CGACGCCCGC CCGCGCGCTC
GGCGAATTCA TCCGCGCGCA CCGCGAACGG CTGTCGCCGC AGGCCGTCGG CCTGCCGCCC
GGCCCGCGCC GCCGCACGCC GGGGCTGCGG CGCGAGGAAG TCGCGCAGCT GTGCGGCGTC
AGCCCGACCT GGTACACGTG GATCGAGCAG GGCCGCCCGG TGTCGGCGTC GGCCGACGCG
CTCGCGCGGA TCGCCGTCGC GCTGCAGTTG TCGAAGGCCG AACGCGCGTA CCTGTTCGAG
CTGGCCGCGC AGCGCGATCC GGCCGAGCCC GACGTCGCGG CCGGCGACCT GCCGCCGACG
CTCGCGGCGA CCGTCGCCGC GATCGCCACG CCCGCCTACG TGCTCGACCG GCAATGGAAC
GCCCTCGCGT GGAACGCGCC GGCCGCCGCG CTGTTCACGG GCTGGCTCGA CGGCGAGCAC
GACCGCAACC TGCTGCGCTT CACGTTCATG GCGCCGGCCG CGCGCACGCT GATCGTCGAC
TGGGAAACCC GCGCGCGCCG GCTCGCGGCC GAATTCCGCG CCGACTCGAT CCGCCACCTC
GCCGACGCGC CGACGCGCGC ACTGATCGAC GCGCTGATGG CCGGCAGCGA CGCGTTCGCG
CAGTACTGGG CGTCGCAGGA CGTGTTCGAG CGCGAAGGCG GCCTGCGCGA GTTCGACCAT
CCGGCCGACG GCCGGCTCGT GTATCAGCAG ATCACGCTGA AGCCCGCGCA CCGCGAGGAT
CTGAAGCTCG TCGTGCTGGT GCGCGATTGA
|
|---|
| Protein sequence | MNQPSSAPTP PLDATPARAL GEFIRAHRER LSPQAVGLPP GPRRRTPGLR REEVAQLCGV
SPTWYTWIEQ GRPVSASADA LARIAVALQL SKAERAYLFE LAAQRDPAEP DVAAGDLPPT
LAATVAAIAT PAYVLDRQWN ALAWNAPAAA LFTGWLDGEH DRNLLRFTFM APAARTLIVD
WETRARRLAA EFRADSIRHL ADAPTRALID ALMAGSDAFA QYWASQDVFE REGGLREFDH
PADGRLVYQQ ITLKPAHRED LKLVVLVRD
|
|---|
| |