Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2414 |
Symbol | |
ID | 4309534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 2663267 |
End bp | 2664343 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638150249 |
Product | phage integrase family protein |
Protein accession | YP_774304 |
Protein GI | 115352465 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4973] Site-specific recombinase XerC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTATC AACTTTTTCG CGTCGGCAAG GTCTGGCACT GCCGCTTCCA AATCAACGGC ACACGCCAGC AACGTTCAAC ACGTGAAACC GATCGACAGC GCGCCGAGCA AGTTGCGGAG GCGGCTGTTC GCCAGGCAAA GCTTTGGACA CGCGACAGCA AGGAGTTGCC GACCTTACGT GAGCTCGTAC GCCAATGGCT CGTTGTCCAC GAGTCGACAG CCAGTCGCGC ACACGTCAAG GTCGTGGAGA CGTTCGGGCG ACTTCACCTC TACGATCTGG CCGACGTGCT GATCGACGAG CTGTCGACCG ATCGCGTCGA GTTCGCGCGC GTGCGGCACC TTGAATCGCA TGCGCCGGTA TCGGCGAATC AGTGGCTCAA GGTGCTGCGC CTGCTCTGCA ATTGGGCCGT ACGGCGCGGC ATCCTGGCGG CCGTCCCGTT CCGTGTCCGC GCGCTGAAGG TCCAGAAGAA GCCGCGGGCG ATCCTGCCCG TCGCAATGGC CCGGGCATGG CTAGATGCCA TCGACGCGGG CGAAGGCAAT CGCGCCGGGG TCCGCACTGC AGTGCGCCTG ATGCTCGGCC TGGGCCTGCG CGAATCGGAG ACCATTACGG CACGATGGGA ATGGCTCGAC GTCGGGCGCC AGACCTACAC GCCGGGTCGG ACGAAGGGCC GCGAGGCTGA TCCGATCCCC GTTCCGGCCT GGTTGATCGA CTACCTGATG GCAGACTGGA AGGCGGCCGG CCCAATCCTG CAGAAAGCGA ACGGTTGCCC GTATCCGGCT GGCTTCACGC GTTCGGCGAT GTTGGCGGCC AACCGGGCAG TCGGTGCCCC CCACATCACC GCGCATCGAC TACGCGGCAC GTTCGCAACG TTGCTCTCTG AAGCCGGTGT CCCGGTGCAA TCGATCCAAC GAGCCCTTCG CCACAAGAAC CTGACGACGA CAGCGGCCTA TCTCGAGGTC GACATGGGCA CCGTGGCCGC CGGCCAGCAA CGCATCGCAG AGAAGATCGG TCTCGGATTA CACACGGAAA CCAGTGGCGC GCCAGTGGCG AACTGTGACC CGCAACCCCA GCAATGA
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Protein sequence | MSYQLFRVGK VWHCRFQING TRQQRSTRET DRQRAEQVAE AAVRQAKLWT RDSKELPTLR ELVRQWLVVH ESTASRAHVK VVETFGRLHL YDLADVLIDE LSTDRVEFAR VRHLESHAPV SANQWLKVLR LLCNWAVRRG ILAAVPFRVR ALKVQKKPRA ILPVAMARAW LDAIDAGEGN RAGVRTAVRL MLGLGLRESE TITARWEWLD VGRQTYTPGR TKGREADPIP VPAWLIDYLM ADWKAAGPIL QKANGCPYPA GFTRSAMLAA NRAVGAPHIT AHRLRGTFAT LLSEAGVPVQ SIQRALRHKN LTTTAAYLEV DMGTVAAGQQ RIAEKIGLGL HTETSGAPVA NCDPQPQQ
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