Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2387 |
Symbol | |
ID | 4309368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 2632458 |
End bp | 2633639 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638150221 |
Product | aminotransferase, class I and II |
Protein accession | YP_774277 |
Protein GI | 115352438 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.462658 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCCGA CCGACCTGCA TCCGCCGCAT TGGCAGCTTT CCGAACGCGC CCGCAAGCTG ACGAGCTCTG CGATCCGCGA GATCCTGAAG GTCACGGAAC GCCCCGAGGT CATCTCGTTC GCAGGCGGCC TGCCGGCTCC GGCGACGTTC CCGGCCGAAC GCATGCGCGC CGCGGCCGAC CGCGTGCTGC GCGACGCGCC CGCCGCCGCA CTCCAGTACA GCGCGACCGA AGGCTACCTG CCGCTGCGCG AATGGATCGC CGAGCGCTAC AGCGTGCGCG TGTCGCAGGT GCTGATCACG ACCGGCTCGC AGCAGGCACT CGACCTGCTC GGCAAGGCGC TGATCGATCC GAACAGCCCG ATCCTCGTCG AAACCCCGAC TTACCTCGGC GCGCTGCAAT CGTTCTCGCT GTACGAGCCG CGCTACGTGC AGGTGCCGAC CGACGAGCAG GGCCTGTTGC CCGAAGGCCT CACGCCCGAG CTGACCCAAG GCGCGCGCCT GCTGTACGCG CAGCCGAACT TCCAGAACCC GACCGGCCGC CGCCTGCCCG TCGAGCGCCG CCGCGCGCTC GCCGCGTTCG CGCAGTCGAG CCCGTTCCCG GTGCTGGAAG ACGACCCGTA CGGCGCGCTG AACTACCAGG GCGAGCCGCT GCCGACGATG CTGTCGATGG CGCCCGACCA CATCGTGCAC CTCGGCACGT TCTCGAAGGT GCTCGCGCCG GGCCTGCGGA TCGGCTACAT CATTGCCCCC GAAGAACTCC ACTTCAAGCT CGTGCAGGCC AAGCAGGCCA CCGACCTGCA CACGCCGACG CTCACGCAGC GCATCGCGCA CGAAGTGATC AAGGACGGCT TCCTCGACGA GCACATCCCG ACGATCCGCC AGTTGTACGG CGCGCAGTGC GAAGCGATGC TCGCGTCGCT CGCGCGGCAC ATGCCGGAAG GCGTCACGTG GAACCGTCCG GAAGGCGGGA TGTTCATCTG GGTGAACCTG CCCGCGCAGA TCGACAGCAT GAAGCTGCTC GCCACGGCCG TGGACAACCA CGTCGCCTTC GTGCCGGGCG CGCCGTTCTT CGCGGACGAT GCTCAACAGA ACACGCTGCG CCTGTCGTTC GTGACGGTGC CGCCCGAGAA GATCGAGGAA GGCGTGGCGC GGCTCGGCAA GCTGCTGCGC GAGCGCCTCT AA
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Protein sequence | MNPTDLHPPH WQLSERARKL TSSAIREILK VTERPEVISF AGGLPAPATF PAERMRAAAD RVLRDAPAAA LQYSATEGYL PLREWIAERY SVRVSQVLIT TGSQQALDLL GKALIDPNSP ILVETPTYLG ALQSFSLYEP RYVQVPTDEQ GLLPEGLTPE LTQGARLLYA QPNFQNPTGR RLPVERRRAL AAFAQSSPFP VLEDDPYGAL NYQGEPLPTM LSMAPDHIVH LGTFSKVLAP GLRIGYIIAP EELHFKLVQA KQATDLHTPT LTQRIAHEVI KDGFLDEHIP TIRQLYGAQC EAMLASLARH MPEGVTWNRP EGGMFIWVNL PAQIDSMKLL ATAVDNHVAF VPGAPFFADD AQQNTLRLSF VTVPPEKIEE GVARLGKLLR ERL
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