| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2378 |
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| Symbol | |
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| ID | 4309359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 2623847 |
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| End bp | 2624764 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638150212 |
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| Product | spermidine synthase-like protein |
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| Protein accession | YP_774268 |
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| Protein GI | 115352429 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCGAC TCATCAAGCG CGCGTCCGCC GAGGCGCGTG CGTTCAAGCA ACGCAAGGCG
TCCGCCTACA ACGGCTCCGA CAAGCTCCAG CCGCCGCGCA TGAAGCGCCG CCCGGAAATC
GACGAACACG ACGACGTGCC CGTGCTCGAA GCGCCGCGCA AGCCGCGCTT CGCGCCCGTC
ACGTTCTCGG AAGAGCGCGG CGTGCGCTTC CTGCACTTCG GCACCGAATG GGTGCAGGGT
GCGATGCGGA TCTCGAAGCC GCTGCACATC GAGCTCGAAT ACGCGCAGCA GATGATGGCG
TGGCTGCTGT TCCTCGAAAC GCCCGAACGG ATCGTCCAGC TCGGGCTCGG CACCGGCGCG
CTGACCAAGT TCTCGCACCG CTTCCTGCCG CACGCGAAGG TCGAGGCAGT CGAACTGAAC
CCGGCCGTGA TCGTCGCGGC CCGCACGATG TTCGCGCTGC CGCCCGACGA CGAACGCCTC
GTCGTGCACG AAGCCGACGC ATGGGACTTC GTCAACGATC CGGCCAACCG CGGCACGACC
GGCGCGCTGC AGATCGACCT GTACGACGCG ACCGCGCGCG GGCCGGTGCT CGACAGCGTC
GCGTTCTACC GGGCGGTGCG CGGCTGCCTC GCCGACGCCG GCATCGCGAC GATCAACCTG
TTCGGCGACC ATCCGAGCTT CGTGCGCAAC ATGAAGCACC TGAACGCAGC GTTCGACCAT
CGCGTGATCG CGCTGCCGGA AGTGCACGAC GGCAACCGGA TCGCGATCGC GTTCTCGGGC
CCCGTGCTCG ACGTGTCGTT CGCGCAGCTG GAAGCACGCG CGAAGCTGAT CGAGGACACG
CTGAAGCTGC CCGCGCGCAA GTGGGTGAAA GCTTTGAAAG AAACGACCGG CGCACGCGAA
TCCTCGTTCG CGATCTGA
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| Protein sequence | MSRLIKRASA EARAFKQRKA SAYNGSDKLQ PPRMKRRPEI DEHDDVPVLE APRKPRFAPV
TFSEERGVRF LHFGTEWVQG AMRISKPLHI ELEYAQQMMA WLLFLETPER IVQLGLGTGA
LTKFSHRFLP HAKVEAVELN PAVIVAARTM FALPPDDERL VVHEADAWDF VNDPANRGTT
GALQIDLYDA TARGPVLDSV AFYRAVRGCL ADAGIATINL FGDHPSFVRN MKHLNAAFDH
RVIALPEVHD GNRIAIAFSG PVLDVSFAQL EARAKLIEDT LKLPARKWVK ALKETTGARE
SSFAI
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