Gene Bamb_2366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2366 
Symbol 
ID4309347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand+ 
Start bp2613182 
End bp2613826 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content65% 
IMG OID638150200 
Productendonuclease III 
Protein accessionYP_774256 
Protein GI115352417 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.249238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCCA CCAAACGACG CGCGATCTAC GAAACGCTGC AAAGCCTCAA TCCGCATCCG 
ACCACCGAGC TCGAATACAC GACGCCGTTC GAGTTGCTGA TCGCGGTGAT GCTGTCCGCG 
CAGGCGACCG ACGTGTCGGT CAACAAGGCG ATGCGCAAGA TGTTTCCGGT CGCGAACACC 
CCGCGACAAA TCGTCGCGCT CGGTGAAGAA GGCGTCGCCG ACTACATCAA GACGATCGGC 
CTGTACCGCA CCAAGGCGAA GAACGTGGTC GCCGCGTGCA ACATCCTGCT CGAGCGCTAC 
GACGGCGAGG TGCCGGCCGA TCGCGAAGCG CTCGAGAGCC TGCCGGGCGT CGGCCGCAAG 
ACCGCGAACG TCGTCCTGAA CACCGCGTTC GGCCAGCCGA CGATCGCGGT CGACACGCAT 
ATCTTCCGCG TCGCGAACCG CACGGGGCTC GCGCCCGGCA AGGACGTGCG GGCCGTCGAG 
GCCGCGCTCG AGAAGTTCAC GCCGAAGGAA TTCCTGCAGG ACGCGCATCA CTGGCTGATC 
CTGCACGGGC GCTATGTGTG CAAGGCCCGC AAGCCCGAAT GCTGGCACTG CGCGATCGAG 
CCGCTGTGCG AATTCCGGCC GAAGACGCCG CCGCCGAACG AGTGA
 
Protein sequence
MNATKRRAIY ETLQSLNPHP TTELEYTTPF ELLIAVMLSA QATDVSVNKA MRKMFPVANT 
PRQIVALGEE GVADYIKTIG LYRTKAKNVV AACNILLERY DGEVPADREA LESLPGVGRK 
TANVVLNTAF GQPTIAVDTH IFRVANRTGL APGKDVRAVE AALEKFTPKE FLQDAHHWLI 
LHGRYVCKAR KPECWHCAIE PLCEFRPKTP PPNE