Gene Bamb_2364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2364 
Symbol 
ID4309345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand- 
Start bp2611378 
End bp2612010 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content63% 
IMG OID638150198 
ProductTetR family transcriptional regulator 
Protein accessionYP_774254 
Protein GI115352415 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAGC CAAAAATCAA AAGAGATCCT GAAGGTACGC GCCGTCGCAT CCTGATGGCG 
GCAGCCGAAG AGTTCGCGAG TGGAGGGCTG TTCGGCGCAC GCGTCGATCA GATCGCACGC 
CGGGCCGAAA CCAACGAGCG CATGCTCTAT TACTACTTCG GCAGCAAGGA ACAGCTGTTT 
ACGGCCGTGC TCGAGCACGC GTTCTCCGCG CTGACCGAGG CGGAGCGCGT GCTGGATCTC 
GATGGCGTCG CACCCGTCGA AGCCGTCACG CGGCTCGCGC ATTTCATCTG GGATTACTAC 
CGCGATCATC CTGAGCTGCT GCGGCTCATC AACAACGAGA ACCTGCACGA AGCGCGCTAC 
CTGCACAAGT CGACGCGGAT CCGCGAGATG ATGTCGCCGA TCGTCGCGAA GCTCGGCAAC 
GTGCTGATGC GCGGCCAGAA GGCCGGGCTG TTCCGCGGCG ACGTCGATCC GCTGCACTTC 
TACGTGACGC TGTCGGGGCT CGGCTACTAC ATCGTGTCGA ACCGCTTCAC GCTCGCCGCG 
ACGCTCGGGC GCGACTTCAG CGACGCCGAC GAACGTGCGG AGATGGTCAG GATGAACACC 
GAGGTGCTGC TCGCGTATCT GCTGCGACGC TGA
 
Protein sequence
MNQPKIKRDP EGTRRRILMA AAEEFASGGL FGARVDQIAR RAETNERMLY YYFGSKEQLF 
TAVLEHAFSA LTEAERVLDL DGVAPVEAVT RLAHFIWDYY RDHPELLRLI NNENLHEARY 
LHKSTRIREM MSPIVAKLGN VLMRGQKAGL FRGDVDPLHF YVTLSGLGYY IVSNRFTLAA 
TLGRDFSDAD ERAEMVRMNT EVLLAYLLRR