| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2363 |
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| Symbol | |
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| ID | 4309344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 2609794 |
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| End bp | 2611275 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638150197 |
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| Product | polyhydroxyalkanoate depolymerase, intracellular |
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| Protein accession | YP_774253 |
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| Protein GI | 115352414 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
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| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.664586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTACC AACTGCACGA ATTCCAGCGG GCCATGTTGA GCCCGCTTAC GGCCTGGGCC
CAGGCCGCCT CCAAGTCGTT CGCCAATCCG TCCAGCCCGT TCTCGCTGAT GCCCGGCGCG
ACGCGGATGG CCGCCGCTTA CGAGCTGATG TACCGGCTCG GCAAGGATTA CGAGAAGCCC
GAATTCAACC TGCACCAGAT CGTCAAGGAC GGCCACAACA TCCCGATCGT CGAGCAGACG
ATCGTCGAGA AGCCGTTCTG CCGGCTGCTG CGCTTCAAGC GCTATTCGGA TGACGCCGAC
GCCGTCACGC AACTGAAGGA CGAGCCGGTC GTGCTGGTCT GCGCGCCGCT GTCGGGCCAC
CATTCGACGC TGCTGCGCGA TACCGTGCGC ACGCTGCTGC AGGATCACAA GGTGTACATC
ACCGACTGGA TCGACGCGCG GATGGTGCCG GTCGAGGTCG GCCCGTTCCA CCTGCACGAC
TACGTCGCGT ACATCCAGGA ATTCATTCGT CATATCGGCG CGCGCAACCT GCACGTGATC
TCCGTGTGCC AGCCGACGGT GCCGGTGCTC GCGGCGATCT CGCTGATGGC GAGCCGCGGC
GAGGACACCC CGCTCACGAT GACGATGATG GGCGGCCCGA TCGACGCGCG CCGCAGCCCG
ACCTCGGTGA ACTCGCTCGC GACGCAGCAC TCGACCTCGT GGTTCGAAAA CAACGTGATC
CACACGGTGC CCGCGAATTA TCCGGGCGAA GGCCGTCACG TGTATCCGGG CTTCCTGCAA
CACACGGGCT TCGTCGCGAT GAACCCGGAA CGCCACGCGC AATCGCACTG GGATTTCTAC
CAGAGCCTGC TGCGCGGCGA CGAGGAAGAC GCCGAAGCGC ACCGCCAGTT CTACGACGAA
TACAACGCGG TGCTCGACAT GGCCGCCGAG TACTACCTCG AGACGATCCG CGTCGTGTTC
CAGGAATTCC GGCTCGCGGA AGGCACGTGG GATGTCGAAG GCGAGCGCGT GCGTCCGCAG
GACATCAAGC ACACCGCGCT GATGACGATC GAAGGCGAGC TCGACGATAT CTCGGGCAGC
GGCCAGACGC ACGTCGCGCA CGAGCTGTGC ACGGGCATCC CGCAGGACGA TCGCCGCAGC
CTGACCGCGG AGAAGTGCGG TCACTACGGG ATCTTCTCGG GCCGCCGCTG GCGCACGATC
ATCTACCCGC AACTGCGCGA CTTCATCCGC GAGCATGCGC CGGAACCGAA GAACGGCATG
GCGAAGAAGC CCACCGAGGC ACCGGTCACG ACGACGCTCG CCGCCGTGCC GTCCAGCAAG
CAGCCCGAAA CGACCCGCGC CACCGTCGCG AAACGCGTGC GCGCGAAGGC ACCGGCCGCC
ACCGTTGCTC CCGCCCGGAC GCCAGCCGCG AAGGCCGCGC CCGCCGCGAA AAGCGCGGGC
AGCACACGGG CGAAATCCCT TCGCGCGCGC AAGGCGGCCT GA
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| Protein sequence | MLYQLHEFQR AMLSPLTAWA QAASKSFANP SSPFSLMPGA TRMAAAYELM YRLGKDYEKP
EFNLHQIVKD GHNIPIVEQT IVEKPFCRLL RFKRYSDDAD AVTQLKDEPV VLVCAPLSGH
HSTLLRDTVR TLLQDHKVYI TDWIDARMVP VEVGPFHLHD YVAYIQEFIR HIGARNLHVI
SVCQPTVPVL AAISLMASRG EDTPLTMTMM GGPIDARRSP TSVNSLATQH STSWFENNVI
HTVPANYPGE GRHVYPGFLQ HTGFVAMNPE RHAQSHWDFY QSLLRGDEED AEAHRQFYDE
YNAVLDMAAE YYLETIRVVF QEFRLAEGTW DVEGERVRPQ DIKHTALMTI EGELDDISGS
GQTHVAHELC TGIPQDDRRS LTAEKCGHYG IFSGRRWRTI IYPQLRDFIR EHAPEPKNGM
AKKPTEAPVT TTLAAVPSSK QPETTRATVA KRVRAKAPAA TVAPARTPAA KAAPAAKSAG
STRAKSLRAR KAA
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