| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2362 |
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| Symbol | |
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| ID | 4309343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 2607747 |
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| End bp | 2609582 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638150196 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_774252 |
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| Protein GI | 115352413 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.897643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGCCT TGATCGAAGA CTACGCCCTC GTCGGCGACG GACACACCGC CGCGCTGATT
TCGAAAGAAG GCTCCGTCGA CTGGCTGTGC TGGCCCCGCT TCGATTCGGG CGCCTGTTTC
GCGGCGCTGG TCGGCACCCC CGAGCACGGC CGCTGGCTGC TCGCGCCGGC TGCCGACGCC
GCGATCACGC ACACGTCACG CCGCTACCGC GGCGACACGC TGATTCTCGA AACCGACTAC
GAAAGCGCCG ACGGCGCCGT CACCGTGATC GACTTCATGC CGCCCGGCAA TGGCTGGTCG
GAACTCGTGC GGATCGTCGT CGGCCGGCAC GGCACGATGA AGATGCGCAT GGAGCTGGTG
TTGCGCTTCG ACTACGGTTT CTCGATCCCG TGGGTCACGC AGCTGTCACG CGAGAACGGG
GTGAAAGCAA TCGCCGGACC CGATACGGTC GTGCTGCGCA CGCCGGTCGA GCTCACCGGC
AAGAACCTGC ACACGCTCGC CGAATTCACG GTGAGCGCCG ACGAGCGCAT CCCGTTTTCG
CTCGGCTACG CGGCGTCCCA CCTGCGGCTG CCGCCCGCGC GCGATCCGCT GTCGATGCTC
GCGCGCACCG AGAACTACTG GCTTGAATGG TCGGGGCGCT GCCAGGTGCA GGGCCGCTAC
GCGGCCGCCG TGCGCCGCTC GCTGATCACG CTGAAGGCGC TCGCGTACGA GCCGACCGGC
GGCATCGTCG CGGCGCCCAC CACGTCGCTG CCCGAGAAGA TCGGCGGCAA CCGCAACTGG
GACTATCGCT ACTGCTGGCT GCGCGATGCG ACGATCACGC TGCTCGCGCT GATGCGCGGC
GGCTACTACG ACGAGGCGCG CGCGTGGCGC ACGTGGCTCG GCCGCGTGAT GGCCGGCTCG
CCCGAGCAGA TCCAGATCAT GTACGGGATC GCCGGCGAGC GCCGGCTGCC GGAAATGGAA
CTCGACTGGC TGCCCGGCTA CCAGGATTCG AAACCGGTGC GCGTCGGCAA CGGCGCCGCC
AACCAGCTGC AGCTCGACGT GTTCGGCGAG ATCATGGCCG CGCTGCATCT CGCGCGCGTG
GGCGGCCTGC AGGCCGACGA CACGGTCTGG TCCGTGCAAT GCGCGCTGCT CGATCATCTC
GAGAAGATCT GGCAGGAGCC GGATGAAGGC ATCTGGGAAA CGCGCGGCGG ACGCCGTCAT
TTCACGTTCT CGAAGGTGAT GGCGTGGGTC GCGTTCGACC GCGCGATCAA GTCGGCGGAG
ATGTTCCGGC TGCCCGGCTC GCTCGACCGC TGGCGCGCGC TGCGCGACCG GATTCATGCT
GATGTATGCG ACAACGCGTG GCATGAAGGC AAGCAGTCGT TTGCACAAAG CTACGGCAGC
GACGAGCTCG ACGCGAGCGT GCTGCTGATG CCGCTGCTCG GCTTCTTGCC GCCGGAAGAC
CCGCGCATCG TCGGCACGGT CGAGGCGATC GAGCGGGAAT TGCTGCACGA CGGGCTCGTG
ATGCGCTACC GCACGACCGA ATACGACGAC GGCCTGCCGC CCGGCGAAGG CACGTTTCTC
GCATGCAGCT TCTGGCTGGT CGACAATTAC GCGCTGCTCG GCCGAATCGA CGACGCGCAC
CGGCTGTTCA GCCGGCTGCT CGCGCTGTCC AACGACCTCG GGCTGCTTGC CGAGGAGTAC
GACCCGGTCG AAGGGCGGCT CGTCGGCAAT TTCCCGCAGG CGTTCTCGCA CGTGGCGCTG
GTGCATACCG CGATGAACCT CATGCACCAC GAAGATGCAA TGGCGCGCGC GGCGGGCCAG
CCGGCCCCCG CCCCGGCCAT GGCGACGGGG CGCTGA
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| Protein sequence | MPALIEDYAL VGDGHTAALI SKEGSVDWLC WPRFDSGACF AALVGTPEHG RWLLAPAADA
AITHTSRRYR GDTLILETDY ESADGAVTVI DFMPPGNGWS ELVRIVVGRH GTMKMRMELV
LRFDYGFSIP WVTQLSRENG VKAIAGPDTV VLRTPVELTG KNLHTLAEFT VSADERIPFS
LGYAASHLRL PPARDPLSML ARTENYWLEW SGRCQVQGRY AAAVRRSLIT LKALAYEPTG
GIVAAPTTSL PEKIGGNRNW DYRYCWLRDA TITLLALMRG GYYDEARAWR TWLGRVMAGS
PEQIQIMYGI AGERRLPEME LDWLPGYQDS KPVRVGNGAA NQLQLDVFGE IMAALHLARV
GGLQADDTVW SVQCALLDHL EKIWQEPDEG IWETRGGRRH FTFSKVMAWV AFDRAIKSAE
MFRLPGSLDR WRALRDRIHA DVCDNAWHEG KQSFAQSYGS DELDASVLLM PLLGFLPPED
PRIVGTVEAI ERELLHDGLV MRYRTTEYDD GLPPGEGTFL ACSFWLVDNY ALLGRIDDAH
RLFSRLLALS NDLGLLAEEY DPVEGRLVGN FPQAFSHVAL VHTAMNLMHH EDAMARAAGQ
PAPAPAMATG R
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