| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2352 |
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| Symbol | dnaE |
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| ID | 4309333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 2590682 |
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| End bp | 2594215 |
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| Gene Length | 3534 bp |
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| Protein Length | 1177 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638150186 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_774242 |
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| Protein GI | 115352403 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGATC CTCGCTTCGT CCATCTTCGC GTTCACTCCG AATTCTCGAT TGCCGACGGC
ATCGTGCGTC TCGACGACAT CGTCAAGGCG GCGGCCGCGG ACGGCCAGGG CGCGCTCGCC
CTCACCGATC TCGGCAACGC ATTCGGCCTC GTCCGTTTCT ACCAGGAAGC CCGCGGCAAG
GGCATCAAGC CGATCGCCGG CTGCGACGTC TGGATCACCA ATCCGGACGA TCGCGACAAA
CCGTCGCGCC TGCTGCTGCT GGTGAAGGAC AAGGTCGGCT ACCTGAACCT GTGCGAGCTG
CTGTCGAAGG CATGGCTCAC GAACCAGTAC CGCGGCCGCG CGGAGCTCGA CGCGAGCTGG
CTCGACGGCG AGCTGTCGCA AGGGCTGCTG GCGCTGTCGG GCGCGCAGCA GGGCGATATC
GGGCTCGCGT TCGCGGCCGA TAACGAGGAA GCCGCGCGCC GTCATGCCGA GCGCTGGGCG
AAGGTGTTCC CGGGCGGCTT CTACATCGAG CTGCAGCGTT ACGGCCAGCC GGGCGCCGAG
GCGTACATCC AGCAGGCCGC GACGCTCGCC GCGTCGCTCG GTCTGCCGGT CGTCGCGACG
CATCCGACGC AGTTCATGAC CGACGACGAT TTCACCGCGC ACGAAGCGCG CGTGTGCATC
TCGGAAGGCG ACATGCTCGC GAATCCGCGG CGCCAGAAGC GCTTCACGAC CGATCAGTAC
TTCCGCACGC AGGACGAGAT GGTCGCGCTG TTCGCCGATC TGCCGTCGGC GGTCGCGAAC
ACGGTCGAGA TCGCGAAGCG CTGCAACCTG AAGCTCGAGC TCGGCAAGCC GAAGCTGCCG
CTGTTCCCGA CGCCGGACGG CATGTCGCTC GACGATTACC TGGTCCAGCT GTCGAAGGAG
GGGCTCGAGA AGCGCCTCGA ACAGCTGTAT CCGGATACGG CCGAGCGTGA CGCGCAGCGC
GACACGTACT ACAAGCGGCT CGAATTCGAG TGCGGGACCA TCACGAAGAT GGGCTTCCCG
GGCTACTTCC TGATCGTTGC CGATTTCATC AACTGGGCGA AGAACAACGG CGTGCCGGTC
GGCCCGGGCC GCGGCTCGGG CGCCGGCTCG CTGGTCGCAT ACGCGCTCGG CATCACCGAT
CTGGATCCGC TGCGCTACAA CCTGCTGTTC GAGCGATTCC TGAATCCGGA ACGCGTATCG
ATGCCCGACT TCGACATCGA CTTCTGCCAG CACGGCCGCG ATCGCGTGAT CCAGTACGTG
AAGGAAAAAT ACGGCGCGGA CGCCGTGTCG CAGATCGCCA CCTTCGGCAC GATGGCCGCG
AAGGCGGCCG TGCGCGACAT CGGCCGCGTG CTCGATCTCG GCTACATGTT CACCGATGGC
ATCGCGAAGC TGATCCCGTT CAAGCCGGGC AAGCACGTGA CGATCGCCGA CGCGATGAAG
GAAGAGCCGC AACTGCAGGA GCGCTACGAC CACGAGGACG AAGTGCACCA GCTGCTCGAC
CTCGCGCAGC GCGTCGAGGG GCTGACGCGT AACGTCGGGA TGCACGCGGG CGGCGTGCTG
ATCGCGCCCG GCAAGCTGAC CGATTTCTGC CCGCTGTACA CGCAGGGCGA CGACGGCGGC
GTCGTCAGCC AGTATGACAA GGACGACGTC GAAGCCGTCG GCCTCGTGAA GTTCGACTTT
CTGGGTCTCA CGACACTGAC GATCCTCGAC TGGGCCGAGC GCTACATCCG CCGCCTCGAT
GCGTCGAAGG CCGACTGGTC GCTCGCGCAG GTGCCGCTCG ACGATCCCGC GTCGTTCCAG
ATCCTGAAGA AGGCCAACAC GGTCGCCGTG TTCCAGCTGG AAAGCCGCGG GATGCAGGGC
ATGCTGAAGG ACGCGCAGCC CGACCGCTTC GAGGACATCA TCGCGCTCGT GTCGCTGTAC
CGTCCGGGCC CGATGGACCT GATCCCGAGC TTTTGCGCAC GTAAGCACGG TCGCGAGAAA
GTCGAGTATC CGGATCCGCG CGTCGAACCC GTCCTGAAAG AGACCTACGG CATCATGGTC
TATCAGGAGC AGGTGATGCA GATGGCGCAG ATCATCGGCG GCTACTCGCT CGGCGGCGCC
GACTTGCTGC GTCGCGCGAT GGGCAAGAAG AAGCCCGAGG AGATGGTCAA GCATCGCGAG
ATCTTCGCCG AGGGTGCGGC GAAGAACGGC CTCACGCGCG AGAAGTCCGA CGAGATCTTC
GACTTGATGG AGAAGTTCGC GGGCTACGGC TTCAACAAGT CGCACGCGGC GGCCTACGCA
TTGCTCGCGT ATTACACCGC GTGGCTGAAG GCGCACCATC CGGCCGAATT CATGGCGGCC
AACATGACGC TCGCGATGGA CGACACCGAC AAGGTGAAGA TCCTGTTCGA CGATTGCATC
GTGAACAACC TCGTCGTGCT GCCGCCGGAC ATCAACCAGT CGCATTACCG CTTCGAGCCG
GTCGGCGAAG CCGACGGCAA GCGCTCGCGC ACGATCCGCT ACGGCCTCGG CGCGGTGAAG
GGCAGCGGCC AGAACGCGAT CGAGGAAATC CTGCGCGCGC GCGAGGAAAA GCCGTTCACC
GACCTGTTCG ACTTCTGCGA GCGGATCGAC CGGCGCGTCG TCAATCGCCG CACGGTCGAG
GCCCTGATCC GCGCCGGCGC ATTCGATTCG CTGAACGCGA ACCGCGCGCA GATGCTCGCG
TCGGTGCCGC TCGCGATGGA AGCGGCCGAG CAGGCCGCGG CGAACGCGAT GCAGGCCGGC
CTGTTCGACA TGGGCGCCGA GTCGCCGCAC GCGCATGCGC TCGTCGACGA ACCCGCTTGG
GACGACAAGC GCCGCCTGCA GGAAGAGAAG GGCGCGCTCG GCTTCTACCT TTCCGGCCAC
CTATTCGACG CGTATCGCGA CGAAGTGCGC CGGTTCGTGA GGCAGAAGAT CGGCGATCTG
AAGGAGGGGC GCGATAAGCT CGTCGCGGGC ATCATCGCGT CGCTGCGCAC GCAGATGACC
CAGCGCGGCA AGATGCTGAT CGCGTTGCTC GACGACGGTT CGGGCCAGTG CGAGATCACG
ATCTTCAACG AGCAGTTCGA GGCGAACAAG GCGCTGTTCA AGGAAGACGA ACTGCTGATC
GTGCAGGGGC AGGCGCGCAA CGACGCGTTC ACCGGCGGTC TGCGCTTCAC GGCCGACACG
GTGATGGATC TCGAGCGTGC GCGCAGCCGC TACGCGCAGG CGGTGCGGCT CACGATGAAC
GGCAATGCGG ATGCGGCGGC GCTGCGCCGC GTGCTCGAAC CGCACGTGTC GAAGGACGAT
TCGGCGGCCG CGCCCGCGTT CGAGGCGCCC GTGCCGCGTG GCGGCGGGCG CGACGGCGGC
CGTCGCCCGC AGGCGCCGTT GCCGAACGGG CTCGCGGTGC AGGTTCACTA CAGCAACGCG
CGCGCGCAGG GCGAAATGCG TCTTGGCGAC GCGTGGCGCG TGAAGCCGAG CGACACGCTG
CTCGCGGAGC TGCGCGCGAC CTTCGACGGC AGCGTCGTCG AAATCACGTA CTGA
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| Protein sequence | MSDPRFVHLR VHSEFSIADG IVRLDDIVKA AAADGQGALA LTDLGNAFGL VRFYQEARGK
GIKPIAGCDV WITNPDDRDK PSRLLLLVKD KVGYLNLCEL LSKAWLTNQY RGRAELDASW
LDGELSQGLL ALSGAQQGDI GLAFAADNEE AARRHAERWA KVFPGGFYIE LQRYGQPGAE
AYIQQAATLA ASLGLPVVAT HPTQFMTDDD FTAHEARVCI SEGDMLANPR RQKRFTTDQY
FRTQDEMVAL FADLPSAVAN TVEIAKRCNL KLELGKPKLP LFPTPDGMSL DDYLVQLSKE
GLEKRLEQLY PDTAERDAQR DTYYKRLEFE CGTITKMGFP GYFLIVADFI NWAKNNGVPV
GPGRGSGAGS LVAYALGITD LDPLRYNLLF ERFLNPERVS MPDFDIDFCQ HGRDRVIQYV
KEKYGADAVS QIATFGTMAA KAAVRDIGRV LDLGYMFTDG IAKLIPFKPG KHVTIADAMK
EEPQLQERYD HEDEVHQLLD LAQRVEGLTR NVGMHAGGVL IAPGKLTDFC PLYTQGDDGG
VVSQYDKDDV EAVGLVKFDF LGLTTLTILD WAERYIRRLD ASKADWSLAQ VPLDDPASFQ
ILKKANTVAV FQLESRGMQG MLKDAQPDRF EDIIALVSLY RPGPMDLIPS FCARKHGREK
VEYPDPRVEP VLKETYGIMV YQEQVMQMAQ IIGGYSLGGA DLLRRAMGKK KPEEMVKHRE
IFAEGAAKNG LTREKSDEIF DLMEKFAGYG FNKSHAAAYA LLAYYTAWLK AHHPAEFMAA
NMTLAMDDTD KVKILFDDCI VNNLVVLPPD INQSHYRFEP VGEADGKRSR TIRYGLGAVK
GSGQNAIEEI LRAREEKPFT DLFDFCERID RRVVNRRTVE ALIRAGAFDS LNANRAQMLA
SVPLAMEAAE QAAANAMQAG LFDMGAESPH AHALVDEPAW DDKRRLQEEK GALGFYLSGH
LFDAYRDEVR RFVRQKIGDL KEGRDKLVAG IIASLRTQMT QRGKMLIALL DDGSGQCEIT
IFNEQFEANK ALFKEDELLI VQGQARNDAF TGGLRFTADT VMDLERARSR YAQAVRLTMN
GNADAAALRR VLEPHVSKDD SAAAPAFEAP VPRGGGRDGG RRPQAPLPNG LAVQVHYSNA
RAQGEMRLGD AWRVKPSDTL LAELRATFDG SVVEITY
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