Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2339 |
Symbol | |
ID | 4309320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 2575111 |
End bp | 2576580 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638150173 |
Product | ribonuclease |
Protein accession | YP_774229 |
Protein GI | 115352390 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0414308 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGAAG AAATCCTGAT CAACCTCACG CCCCAGGAAA CACGGGTCGC ACTCGTCCAG CAAGGCGCGG TGCAGGAGCT TCACGTCGAG CGCACGCTGT CGCGCGGGCG GGTCGGCAAC ATCTACCTCG GCAAGGTCGT GCGCGTGCTA CCCGGCATGC AGTCGGCGTT CATCGACATC GGCCTGGAAC GCGCGGCGTT CCTGCACGTC GCGGACATCT GGCATCCGCG CCTCGCCGGC GAGCCGCAGT CGGGCACGCC GCACCAGCCG ATCGAGAAGA TCGTGTTCGA AGGCCAGACG CTGATGGTCC AGGTGATCAA GGATCCGATC GGCACGAAGG GCGCGCGACT GTCGACGCAA GTCAGCATCG CGGGCCGCAC GCTCGTGTAT CTGCCGCAGG AGCCGCACAT CGGCATCTCG CAGAAAATCG AGAGCGAGGC CGAGCGCGAG GCCGTGCGCG CGCGCCTGAC CGCCGTGATC CCGCCGGACG AGAAAGGCGG CTACATCGTG CGCACGATCG CCGAGGATGC GACCTCCGAG GAGCTGGCCG GCGACGTCAC GTACCTGCGC AAGACCTGGG CGACGATCGT CGCGCAGGCG CAGCGGCTGC CGGCGACGAG CCTGCTGTAC CAGGATCTCG ACCTCGCGCA GCGCGTGCTG CGCGATTTCT CGAACGACGA CACGACGCGT ATCCAGGTCG ATTCTCGCGA GACGTACCAG CGCCTCGCGG AATTCGCGGA CGAGTTCACG CCGGCGGTGA GTCCGAAGCT GCATCACTAC ACCGGCGAGC GGCCGCTGTT CGACCTGTAC AACATCGAGA CGGAGATCCA GCGCGCGCTG TCGCGCCGCG TCGACCTGAA GTCGGGCGGC TACCTGATGA TCGACCAGAC CGAGGCGATG ACGACGATCG ACGTGAACAC CGGCGGCTAC GTCGGCGCAC GCAACTTCGA CGACACGATC TTCAAGACCA ACCTCGAGGC CGCGCACACG ATCGCGCGGC AATTGCGGCT GCGCAATCTC GGCGGGATCA TCATCATCGA CTTCATCGAC ATGGAGAACG CCGAGCATCG CGACGCGGTG CTGTCGGAGC TGAAGAAGGC GCTGTCGCGC GACCGCACGC GCGTGACGGT CAACGGCTTC TCGCAGCTCG GGCTCGTCGA GATGACGCGC AAGCGCACGC GCGAATCGCT CGCGCACGTG CTGTGCGAGC CGTGCCCGAC CTGCCAGGGC AAGGGCCAGG TGAAGACGTC GCGCACCGTG TGCTACGACA TCCTGCGCGA GATCCTGCGC GAGTCGCGCC AGTTCAATCC GCGCGAATTC CGCGTGATCG CCGCGCAGCA GGTGATCGAC CTGTTCCTCG ACGAGGAGTC GCAGCATCTC GCGATGCTGA TCGACTTCAT CGGCAAGCCG GTGTCGCTGC AGGTCGAGTC GAACCTGAGC CAGGAGCAGT ACGATATCGT GCTGATGTAA
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Protein sequence | MNEEILINLT PQETRVALVQ QGAVQELHVE RTLSRGRVGN IYLGKVVRVL PGMQSAFIDI GLERAAFLHV ADIWHPRLAG EPQSGTPHQP IEKIVFEGQT LMVQVIKDPI GTKGARLSTQ VSIAGRTLVY LPQEPHIGIS QKIESEAERE AVRARLTAVI PPDEKGGYIV RTIAEDATSE ELAGDVTYLR KTWATIVAQA QRLPATSLLY QDLDLAQRVL RDFSNDDTTR IQVDSRETYQ RLAEFADEFT PAVSPKLHHY TGERPLFDLY NIETEIQRAL SRRVDLKSGG YLMIDQTEAM TTIDVNTGGY VGARNFDDTI FKTNLEAAHT IARQLRLRNL GGIIIIDFID MENAEHRDAV LSELKKALSR DRTRVTVNGF SQLGLVEMTR KRTRESLAHV LCEPCPTCQG KGQVKTSRTV CYDILREILR ESRQFNPREF RVIAAQQVID LFLDEESQHL AMLIDFIGKP VSLQVESNLS QEQYDIVLM
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