| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2333 |
|---|
| Symbol | |
|---|
| ID | 4309130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 2570421 |
|---|
| End bp | 2571701 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638150167 |
|---|
| Product | phosphoribosylamine--glycine ligase |
|---|
| Protein accession | YP_774223 |
|---|
| Protein GI | 115352384 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0151] Phosphoribosylamine-glycine ligase |
|---|
| TIGRFAM ID | [TIGR00877] phosphoribosylamine--glycine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0928506 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTAC TCGTCGTCGG TTCAGGCGGC CGCGAACATG CGCTCGCGTG GAAGCTCGCG
CAATCGCCGC GCGTCCAGAT GGTCTACGTC GCGCCGGGCA ATGGCGGCAC GGCGCAAGAC
GCGCGTCTGA AAAACGTCGA CATCACGTCG CTCGACGCGC TGGCCGATTT CGCGGAAAGC
GAAGGCGTCG CGTTCACGCT CGTCGGGCCG GAAGCGCCGC TCGCGGCCGG CATCGTCAAC
CTGTTCCGCG CCCGCGGCCT GAAGGTGTTC GGCCCGACCC GCGAAGCCGC GCAGCTCGAA
AGCTCGAAGG ATTTCGCGAA GGCGTTCATG AAGCGTCACG GCATTCCGAC CGCCGACTAC
GAAACCTTCT CCGACGCCGC CGCCGCGCAC GCGTACATCG ACGCGAAGGG TGCGCCGATC
GTCGTGAAGG CAGACGGCCT CGCGGCCGGC AAGGGTGTCG TCGTCGCGAT GACGCTGGAA
GAAGCGCACG CCGCGGTCGA CATGATGCTG TCGGGCAACA AGCTGGGCGA CGCCGGCGCG
CGCGTCGTGA TCGAGGAATT CCTCGACGGC GAGGAAGCGA GCTTCATCGT GATGGTCGAC
GGCAAGCACG CGCTGGCACT GGCATCGAGC CAGGACCACA AGCGCCTGCT CGACGAGGAC
CGCGGCCCGA ACACGGGCGG CATGGGCGCC TATTCGCCCG CGCCGATCGT CACGCCGCAG
ATGCACGCAC GCGTGATGCG CGAAATCATC ATGCCGACGG TCCGCGGGAT GGAAAAGGAC
GGCATCCGCT TCACGGGCTT CCTGTATGCG GGCCTGATGA TCGACAAGGA AGGCAATCCG
CGCACGCTCG AGTTCAACTG CCGGATGGGC GACCCCGAGA CGCAGCCGAT CATGGCGCGC
CTGAAGAGCG ATTTTTCGAA GGTCGTCGAA CAGGCGATCG CGGGCACGCT CGATTCGGTC
GAGCTCGACT GGGATCGCCG CACCGCGCTC GGCGTCGTGC TGGCCGCGCA CGGCTATCCG
GACGCGCCGC GCAAGGGCGA CCGCATCAAC GGGATCCCGG CCGAGACGGC CCAGGCCGTG
ACGTTCCATG CAGGCACGAC GCTCGCCGAA GGCGACAAGC TCATTACCTC GGGCGGCCGC
GTGCTGTGCG TGGTCGGCCT CGCCGATTCG GTGCGCGAAG CGCAGCAGCA TGCATACGAC
ACGATCAACC AGATCAATTT CGAAGGCATG CAGTACCGGC GCGACATCGG CTTCCGTGCA
CTGAACCGGA AGAGCGCGTG A
|
|---|
| Protein sequence | MKLLVVGSGG REHALAWKLA QSPRVQMVYV APGNGGTAQD ARLKNVDITS LDALADFAES
EGVAFTLVGP EAPLAAGIVN LFRARGLKVF GPTREAAQLE SSKDFAKAFM KRHGIPTADY
ETFSDAAAAH AYIDAKGAPI VVKADGLAAG KGVVVAMTLE EAHAAVDMML SGNKLGDAGA
RVVIEEFLDG EEASFIVMVD GKHALALASS QDHKRLLDED RGPNTGGMGA YSPAPIVTPQ
MHARVMREII MPTVRGMEKD GIRFTGFLYA GLMIDKEGNP RTLEFNCRMG DPETQPIMAR
LKSDFSKVVE QAIAGTLDSV ELDWDRRTAL GVVLAAHGYP DAPRKGDRIN GIPAETAQAV
TFHAGTTLAE GDKLITSGGR VLCVVGLADS VREAQQHAYD TINQINFEGM QYRRDIGFRA
LNRKSA
|
|---|
| |