| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2282 |
|---|
| Symbol | |
|---|
| ID | 4311733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 2519117 |
|---|
| End bp | 2520427 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638150115 |
|---|
| Product | NADH-quinone oxidoreductase, F subunit |
|---|
| Protein accession | YP_774172 |
|---|
| Protein GI | 115352333 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
|---|
| TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.502286 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCCC TTCACGACCG TCACATCAAA CCGCTGATCC TTGCTGGTCT GAACGGCGAG
AACTGGCATC TCGAAGATTA CGTTGCGCGC GGCGGCTACA AGCAGCTGCG CCGCATTCTC
GAGGAAAAGA TTCCGCCGGA GCAGGTGATC GCCGACGTGA AGGCGTCGGG CCTGCGCGGC
CGTGGCGGTG CGGGCTTCCC GACCGGCCTG AAGTGGAGCT TCATGCCGCG CCAGTTCCCC
GGGCAGAAGT ACCTCGTCTG CAACTCGGAC GAAGGCGAGC CGGGCACGTT CAAGGATCGC
GACATCCTGC GCTGGAACCC GCATGCGCTG ATCGAAGGCA TGGCCATCGG CGCGTACGCG
ATGGGCATCA CCGTCGGCTA CAACTACATC CACGGCGAAA TCTTCGAAGT GTATCGACGC
TTCGAGGCCG CGCTCGATGA AGCGCGTGCC GCGGGTTTCC TCGGCGACAA CATCATGGGC
TCGGAATTCT CGTTCCAGTT GCACGCGCAC CACGGTTACG GCGCGTACAT CTGCGGCGAG
GAAACGGCGC TGCTCGAGTC GCTCGAAGGC AAGAAGGGCC AGCCGCGCTT CAAGCCGCCG
TTCCCGGCGA GCTTCGGCGT GTACGGCAAG CCGACCACGA TCAACAACAC CGAGACGTTC
GCCGCGGTGC CGTTCCTGCT GTCCATCGGG CCGCAGAATT ACCTCGAGAT CGGCAAGCCG
AACAACGGCG GCACGAAGAT CTTCTCGGTG TCGGGCGACG TCGAGCGTCC GGGCAACTAC
GAAGTGCCGC TCGGCACGCC GTTCGCGACG CTGATGGAGC TCGCCGGCGG GATGCGCGGC
GCTCGCAAGA TCAAGGCCGT GATTCCGGGC GGTTCGTCGG CGCCGGTGAT CCCGGGCGAC
ATCATGATGC AGACCGATCT CGATTACGAC TCGATCGCGA AGGCGGGCTC GATGCTCGGC
TCTGGCGCGG TGATCGTGAT GGACGAGACG CGCTGCATGG TGCGTTCGCT GCTGCGCCTG
TCGTACTTCT ACTACGAGGA ATCGTGCGGC CAGTGCACGC CGTGCCGTGA GGGCACCGGC
TGGCTGTATC GCGTCGTGAA TCGTATCGAG CACGGCGAAG GGCGCCAGGA AGATCTGGAC
CTGCTGAACT CGGTTGCCGA GAACATCATG GGCCGCACGA TCTGCGCGCT CGGCGATGCG
GCGGCGATGC CGGTGCGCGG GATGCTCAAG CATTACTGGG ACGAATTCGC GTACCACGTC
GAGCACAAGC ACTGCATGGT CGGCGGCCAC GCGCACGCTG CGGCAGCCTG A
|
|---|
| Protein sequence | MTSLHDRHIK PLILAGLNGE NWHLEDYVAR GGYKQLRRIL EEKIPPEQVI ADVKASGLRG
RGGAGFPTGL KWSFMPRQFP GQKYLVCNSD EGEPGTFKDR DILRWNPHAL IEGMAIGAYA
MGITVGYNYI HGEIFEVYRR FEAALDEARA AGFLGDNIMG SEFSFQLHAH HGYGAYICGE
ETALLESLEG KKGQPRFKPP FPASFGVYGK PTTINNTETF AAVPFLLSIG PQNYLEIGKP
NNGGTKIFSV SGDVERPGNY EVPLGTPFAT LMELAGGMRG ARKIKAVIPG GSSAPVIPGD
IMMQTDLDYD SIAKAGSMLG SGAVIVMDET RCMVRSLLRL SYFYYEESCG QCTPCREGTG
WLYRVVNRIE HGEGRQEDLD LLNSVAENIM GRTICALGDA AAMPVRGMLK HYWDEFAYHV
EHKHCMVGGH AHAAAA
|
|---|
| |