Gene Bamb_2258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2258 
Symbol 
ID4311709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand+ 
Start bp2495982 
End bp2496656 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content68% 
IMG OID638150091 
Productmembrane protein-like protein 
Protein accessionYP_774148 
Protein GI115352309 
COG category[S] Function unknown 
COG ID[COG3235] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.111038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTTTTC TTTTCACACC GCTTCCGCTC TGGGTTGGCA TCGGCGGCTG GATCGGCGCC 
GTGGCTCTGC TCGCGCTCGC GCTCTGGAAT CGCCCGTTCG TCCGCTTGCA GGACGCAACG 
CTCCAGCACG TGTGGCTCGC GCTCGTCACT GCAATTACGG TTCTGTGGGC CTCGAATGCA 
TGGCTCGAGG ACGGCATCGT CATGCACCTG CTCGGCGCGA CGCTGCTCGT CACGCTGTTC 
GACTGGACGC TTGCGCTGAT CGCGATGGGT GCCGTCACGG GCATCGCCGC GATCGTCTTC 
GATGCGCCGT GGCACGGCAT CGGCCTCACC TATCTGATCT ACGGCGCGCT ACCGGTGGCC 
GTATCCGCGT TGCTGCAGCG CGCCGTGATC GCGTGGCTCC CGCATAACCT CGCATCGTTC 
ATCACCGGTC AGGGGTTCTT GTCCCCGGCT ATCGCGATCG TCGCGGTCGC CGCGGCCGCG 
GCCGGCGTCC AGCTCGCGCT CGCGGACGGC GTGCCCGTCG TGATTCCCGC CGGCTATCTG 
CTCAATACCG CGCTGCTCGC GCTCGGCGAA GCGTGGTTCA CCGGCATGGC CACCGCGCTC 
ATCGCCGTCT ATCGTCCGGC GTGGGTCACG ACGTTCGACG TGCGGCGCTA TCGTCTCGGC 
GGCCCGCGCG CCTGA
 
Protein sequence
MGFLFTPLPL WVGIGGWIGA VALLALALWN RPFVRLQDAT LQHVWLALVT AITVLWASNA 
WLEDGIVMHL LGATLLVTLF DWTLALIAMG AVTGIAAIVF DAPWHGIGLT YLIYGALPVA 
VSALLQRAVI AWLPHNLASF ITGQGFLSPA IAIVAVAAAA AGVQLALADG VPVVIPAGYL 
LNTALLALGE AWFTGMATAL IAVYRPAWVT TFDVRRYRLG GPRA