| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2248 |
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| Symbol | |
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| ID | 4311699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 2479822 |
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| End bp | 2481912 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638150076 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_774138 |
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| Protein GI | 115352299 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGAAC ATCACGCCGA AGTCGGCGAC GCGCTCGACG AATCGAAATT CGTGACCTTC
GAAGGGTCGC CATTTCAGCT ATACCAGCCG TATCCGCCCG CAGGCGACCA GCCGACCGCG
ATCGAAACGC TCGTTGAAGG TGTCGGCGAC GGCCTCGCAT TCCAGACGCT GCTCGGCGTG
ACGGGGTCGG GCAAGACCTT CACGATGGCG AACACGATCG CGCGGCTCGG CCGCCCGGCG
ATCGTATTCG CGCCGAACAA GACGCTCGCG GCGCAGCTCT ACGCGGAGTT CCGCGAGTTC
TTCCCGCGCA ACGCGGTCGA GTATTTCGTC TCGTACTACG ACTATTACCA GCCGGAAGCG
TACGTGCCGC AGCGCGACCT GTTCATCGAG AAGGACTCGT CGATCAACGA GCATATCGAG
CAGATGCGGC TGTCGGCGAC GAAGAGCCTG ATGGAGCGCC GCGACGTGGT GATCGTCGCG
ACGGTGTCGG CAATCTACGG TATCGGCAAC CCGTCCGAGT ACCACAAGAT GATCCTGACG
CTGCGCGCCG GTGACAAGCT CGGCCAGCGC GACGTGATCG CGCGATTGAT CGCGATGCAG
TACTCGCGCA ACGATCAGGA CTTCCAGCGC GGCACGTTCC GCGTGCGCGG CGACACGATC
GACATCTTCC CGGCCGAGCA TGCGGAGATG GCCGTGCGCG TCGAGCTGTT CGACGACGAG
GTCGAGACGC TGCAGCTGTT CGACCCGCTG ACGGGCCGCG TGCGGCAGAA GATTCCGCGC
TTCACGGTGT ATCCGTCGTC GCACTACGTG ACGCCGCGCG ACACCGTGAT GCGTGCGGTC
GAGACGATCA AGGAGGAATT GCGCGAGCGC CTCGAGTTCT TCCACCGCGA CGGCAAGCTC
GTCGAGGCGC AGCGCCTCGA GCAGCGCACG CGCTTCGATC TCGAGATGCT GCAGGAACTC
GGCTTCTGCA AGGGCATCGA GAACTACTCG CGGCATTTTT CGGGCGCCGC GCCCGGCGAG
CCGCCGCCGA CGCTCGTCGA CTACCTGCCG CCCGACGCGC TGATGCTGCT CGACGAATCG
CACGTGCTGA TCGGCCAGCT GAACGGCATG TACAACGGCG ACCGCGCGCG CAAGGAGAAT
CTCGTCAACT ACGGATTCCG GTTGCCGTCG GCGCTGGACA ACCGGCCGCT CAAGTTCCCG
GAGTTCGAAC GCAAGATGCG CCAGGTGGTG TTCGTGTCGG CTACGCCTGC CGACTACGAG
AAGCGCGTGA CGGGGCAGAT CGCCGAGCAG GTGGTGCGGC CGACGGGCCT CGTCGATCCG
GAAATCGAAG TGCGCCCGGC CAGCTCGCAG GTCGACGACG TGCTGACCGA GATCAACGCG
CGCGTGAACG CCGGCGAGCG CGTGCTGATC ACCGTGCTGA CGAAGCGGAT GGCCGAGCAG
CTCACCGAGT TTCTCGCCGA CCACGGCGTC AAGGTGCGCT ACCTGCACAG CGACATCGAC
ACGGTGGAGC GGGTCGAGAT CATCCGCGAC CTGCGACTCG GCACGTTCGA CGTGCTGGTC
GGGATCAACC TGCTGCGCGA AGGCCTGGAC ATTCCGGAAG TGTCGCTCGT CGCGATTCTG
GACGCGGACA AGGAAGGCTT CCTGCGCGCC GAGCGCTCGC TGATCCAGAC GATCGGCCGC
GCGGCGCGCA ACGTGAACGG CAAGGCGATC CTCTACGCCG ACACGATGAC CGAATCGATG
AAGCGCGCGA TCGGCGAGAC CGAGCGGCGC CGTGCGAAGC AGATCGCGCA CAACGAGAAG
ATGGGCATCA CGCCGCGCGG CGTCGTGAAG CGCATCAAGG ACATCATCGA CGGCGTCTAC
AACGCCGACG ACGCACGCGC CGAGCTGAAG GAAGCGCAGC AACGCGCGAA GTTCGAGGAC
ATGTCGGAAA AGCAGATCGC GAAAGAAATC AAGCGACTCG AAAAGCAGAT GGCCGACTAC
GCGAAGAACC TCGAGTTCGA AAAGGCCGCG GCCACCCGCG ACCAGCTGGC GCTGCTACGC
GAACGCGTGT TCGGCGCGAA TGTGGGCGAC CACGTCAACG GCGGCCGGTA A
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| Protein sequence | MSEHHAEVGD ALDESKFVTF EGSPFQLYQP YPPAGDQPTA IETLVEGVGD GLAFQTLLGV
TGSGKTFTMA NTIARLGRPA IVFAPNKTLA AQLYAEFREF FPRNAVEYFV SYYDYYQPEA
YVPQRDLFIE KDSSINEHIE QMRLSATKSL MERRDVVIVA TVSAIYGIGN PSEYHKMILT
LRAGDKLGQR DVIARLIAMQ YSRNDQDFQR GTFRVRGDTI DIFPAEHAEM AVRVELFDDE
VETLQLFDPL TGRVRQKIPR FTVYPSSHYV TPRDTVMRAV ETIKEELRER LEFFHRDGKL
VEAQRLEQRT RFDLEMLQEL GFCKGIENYS RHFSGAAPGE PPPTLVDYLP PDALMLLDES
HVLIGQLNGM YNGDRARKEN LVNYGFRLPS ALDNRPLKFP EFERKMRQVV FVSATPADYE
KRVTGQIAEQ VVRPTGLVDP EIEVRPASSQ VDDVLTEINA RVNAGERVLI TVLTKRMAEQ
LTEFLADHGV KVRYLHSDID TVERVEIIRD LRLGTFDVLV GINLLREGLD IPEVSLVAIL
DADKEGFLRA ERSLIQTIGR AARNVNGKAI LYADTMTESM KRAIGETERR RAKQIAHNEK
MGITPRGVVK RIKDIIDGVY NADDARAELK EAQQRAKFED MSEKQIAKEI KRLEKQMADY
AKNLEFEKAA ATRDQLALLR ERVFGANVGD HVNGGR
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