Gene Bamb_2233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2233 
Symbol 
ID4311456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2467096 
End bp2468619 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content66% 
IMG OID638150061 
Producttartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit 
Protein accessionYP_774123 
Protein GI115352284 
COG category[C] Energy production and conversion 
COG ID[COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain 
TIGRFAM ID[TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.102224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGTCA TCAAACAGGA AGACCTGATC CAGAGCATCG CGGATTCGCT GCAGTACATC 
AGCTACTACC ACCCGCTCGA CTACATCCAG GCCCTCGGCC GCGCGTACGA GCTGGAAGAG
AGCCCGGCCG CGAAGGACGC GATCGCGCAG ATCCTCACGA ACAGCCGCAT GTGCGCGGAA
GGCCGCCGCC CGATCTGCCA GGACACCGGC ATCGTCACGA TCTTCGTGAA GGTCGGCATG
GACGTGCGCT GGGACGGCGC GACAATGGGC CTCACAGACA TGATCAACGA AGGCGTGCGC
CGCGGTTACA CGCACCCGGA CAACGTGCTG CGCGCATCGA TCGTCAACCC GCCGGAAGGC
GCGCGCAAGA ACACGAAGGA CAACACCCCG GCCGTGATCC ACTACGAGAT CGTGCCGGGC
GACAAGGTCG ACGTGCAGGT CGCGGCGAAG GGCGGCGGCT CGGAGAACAA GTCGAAGTTC
GTGATGCTGA ACCCGTCGGA TTCGATCGTC GACTGGGTGC TGAAGACGGT CCCGACGATG
GGCGCCGGCT GGTGCCCGCC GGGCATGCTC GGGATCGGCA TCGGCGGCAC CGCTGAAAAG
GCGATGCTGA TGGCGAAGGA ATCGCTGATG GAGCCGATCG ACATTCAGGA AATCATCGCG
CGCGGTCCGA AGGACTGGGT CGAGGAACTG CGCGTCGAGC TGCACGAGAA AGTCAACGCG
CTCGGCATCG GCGCGCAAGG CCTCGGCGGC CTCGCGACCG TGCTCGACGT GAAGATCATG
GCCGCTCCGA CGCACGCGGC GTCGAAGCCG GTCGCGCTGA TCCCGAACTG CGCGGCCACG
CGCCACGCGC ACTTCGTGCT CGACGGCTCG GGTCCGGCCA AGCTTGAAGC GCCGTCGCTC
GACGCCTGGC CGAAGGTCCA GTGGGAACCG AACACCGAAA CCAGCAAGCG CGTCGACCTG
AACACGCTGA CGCCGGAAGA AGTCGCGAGC TGGGCGCCGG GCCAGACGCT GCTGCTGTCG
GGCAAGATGC TCACGGGCCG CGACGCCGCG CACAAGCGCA TCGCCGACAT GCTCGCGAAG
GGCGAGAAGC TGCCGGTCGA CTTCACGAAC CGCGTGATCT ACTACGTGGG TCCGGTCGAT
CCGGTGCGTG ACGAGGTGGT CGGCCCGGCA GGCCCGACGA CGGCCACGCG GATGGACAAG
TTCACCGAGA CGATGCTCGC TCAGACGGGT CTGATCTCGA TGGTCGGCAA GGCCGAACGC
GGCCCGGTCG CGATCGATGC GATCAAGAAG CACAAGGCGG CCTACCTGAT GGCGGTCGGC
GGTGCGGCGT ACCTCGTGTC GAAGGCGATC CGCGGCGCGA AGGTGCTCGC ATTCGAAGAT
CTCGGCATGG AAGCGATCTA CGAGTTCGAC GTGCAGGACA TGCCGGTGAC GGTGGCCGTC
GATTCGTCGG GCACGTCGGT GCACCAGACC GGTCCGAAGG AGTGGCAGGC AAAGATCGGC
AAGATCCCGG TCGCAACCGC TTAA
 
Protein sequence
MTVIKQEDLI QSIADSLQYI SYYHPLDYIQ ALGRAYELEE SPAAKDAIAQ ILTNSRMCAE 
GRRPICQDTG IVTIFVKVGM DVRWDGATMG LTDMINEGVR RGYTHPDNVL RASIVNPPEG
ARKNTKDNTP AVIHYEIVPG DKVDVQVAAK GGGSENKSKF VMLNPSDSIV DWVLKTVPTM
GAGWCPPGML GIGIGGTAEK AMLMAKESLM EPIDIQEIIA RGPKDWVEEL RVELHEKVNA
LGIGAQGLGG LATVLDVKIM AAPTHAASKP VALIPNCAAT RHAHFVLDGS GPAKLEAPSL
DAWPKVQWEP NTETSKRVDL NTLTPEEVAS WAPGQTLLLS GKMLTGRDAA HKRIADMLAK
GEKLPVDFTN RVIYYVGPVD PVRDEVVGPA GPTTATRMDK FTETMLAQTG LISMVGKAER
GPVAIDAIKK HKAAYLMAVG GAAYLVSKAI RGAKVLAFED LGMEAIYEFD VQDMPVTVAV
DSSGTSVHQT GPKEWQAKIG KIPVATA