| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2226 |
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| Symbol | |
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| ID | 4311449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 2456231 |
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| End bp | 2459200 |
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| Gene Length | 2970 bp |
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| Protein Length | 989 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 638150054 |
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| Product | EF hand domain-containing protein |
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| Protein accession | YP_774116 |
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| Protein GI | 115352277 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3179] Predicted chitinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.48504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGACA AGCACCCTCC CAAACAACCA CCGAAAAAGC CCGAGCCGGA CGCCAAGCCG
GCGTACACGC CGCTTGCATG GAGCTATCCG TTTTCGCCTG CGACCAAGGA AGGTGCAACT
CCGGATACCA CGGATCCCAT GACCTACATG AAGGTACTTG CGACCGCGGA GGATGGTTTT
TATCCGCTGG GGGCCAGTGG CATCTGGCAC GGCGGCATTC ACTTCGGCCA GAAGACCGGC
GAGGCGCTGA AACAGGACGA CGGTGTACGC GCGATTGCCA CCGGGGAGGT CGTCGCGTAC
CGGCTCGATA GCGAATACCC TACGCTGACC TATCAGGACC AGCGTCATGC CTTGTACTCG
CGGGGCTTTG TGCTGATCCG CCATACTTTG CAATTGCCAC CCGCACCGAA AAAGACGGAA
CCAGCACCCG CCCCCGCAAA TGCACCAGCC GGATCCCCCC CCTCAGGGGG CAATGCAACG
CCTCCGGCGC CAGCCCCGAC ACCAGCACCC GCGTCCTCCG GTCCGCCGCC CGGTGAAACA
CTGACGTTCT TCAGTCTGTA CATGCATACG CTCGACTGGA AAACGTATAA GGCGGCGCTC
GATCAGCCAA AAACGGCCAA TGCGGATCCC AAGGCACCGC AACTTAAGCC TGCGCCCTAC
TGGGAAGTCG ACCGTTCGTA TCGCGCATTG AAACCGAACA AGCAGGATCT TCCCAAACGC
AAGCCGATCG ATCCCGGTGC GCTCGGCGAC GATTCGTCGC CGCAGCAACA AGGCCCGGAC
GATGTATTGC CGGAGCCTGT AGCGGGTGTG CGGGTTCGGA TTATTCCGAA CGGGAAACTG
CTCGGTTTGC TGCCCGAGGG AACGGAACTT ACCGTGAACG AGGCCGATAA CGGTGGGCGC
AAGGGCTGGG CAAAAATCAC GAAGATCATT AAAGGTGATC CGGTGGGTCC GGTCGTCGGT
CAGTCGCCCG ATGTGCAGTT GAAGTGGGGT TACGTTTTCG TTTCCGAATT GGCGCCGATC
CCTCAGTCCG GCCCCGTCGA TAAGGTGGTC GTGCTCAAGA AGCCGTATCC CGTCAAGGCG
GGAGACGTCG TCGCGCATAT CGGCCAATAC CAGCGCTATA GGGAAGCCAA GCCTACCCCT
CCGCTACCCA CTCGGCCGTT GCTCCATCTC GAAATCTTTG CAGGCCCCGA TCTTCCTGCG
TTCATCACCA AGAGTCAGGC ACGCGCGCAG GAGTTGCCAG AGACGGACAA GCCATTTCTG
GAAATTTTGA AGGGCGCGAA ACTCGTGACG AAAGCGCCCG ATCCGGATTA CACCCTCGAG
CAGACGGGTT TGAAGCTGGT ACCGGTCAGC GATCCGAAAT CGCGATGGGT CAAGGTGCAG
CCCAAGACCG TGAAAATGCC CGCCGAGCAG CCGGAGCCGC CTGCTCCTGC TGGCAAAGGG
AAGCACAAGC CAAAGCCAGC GAAAAAGCCG GAGCCCATCG AGACGTCGAC CGGTAGCCCG
TTCTGGGTCG ACAGCAGCCT GGGTCTGATC AATCAAATGA CAACAGCCCC TGTCAAGGGC
TGGAAAGACT TTCCGCTAAA AGTAAGTCAG GCAGAGGGGC CAGGCACGGA CTTTAGCAAT
GTGTTGCGGA TAATCGATCT CGACAAGGAG GGTCCGCAGA GCTTGGCACG AGAAGACAAG
GACGCGAGTG GAAAAGCCAA GCGCTGGTGG AACGTGACCG TTGGCACGAA AGACGGTGGA
ACTCGTCAAG GATGGGTGCG CGAGCAGGAC CATCCCAAGG TGAAACTGTG CAGCCCGTGG
GACTGGCCGG GGTTCGAACT CGTCGACAAC AGTTCGACCA CAATGGTCGA TATGTTCAAG
CGTTATCTGT TCGTCGCCGG ACTCGCCATG GGAGAGGATC AGGACAACTT CAAACCGAGT
GCGGATGCGT TGGCCACCAG TGACCTCATC CAGAAGCTCG AACAGGCCAT TGATGTCAAT
CACGATGGCA AGGTAACGGC GGCAGAACTG GCGGATGCGC AAAAAACGAA GTGGTTGGCC
GAGGCAATCT CGCATATGGT CGTGAAGAGC GAGAGCGAAT GGGGCGGCAA CATGGGGAAG
TGGGAGGACA TCTTGCCCCA TATGAAGCTC GTGCCGTGGA AATGGCAGAA CGAGATGGAC
CGGATCAAGA AGCTTCAGTG GTGGGAGGAA GTTCAGAGCA TCGACGCGAA GATTCTTCCT
AAAGAGCCGA AGCCATGGCA TTTCCATCCG ATTGGGCTGA TTGGGAATTT CAAACAATCG
TGCAATTGCA TCGATACCGA CAAATTCATT GAAGAATACA AGAAGCAACA CTCTGAAGAT
TTCGGCTGGT ATGATAACCC GGGTTCGAAA AAATCAACCC TTAAACCACT GAATTCAGAA
TCCGAGCAAA ATTTGCGACA ACTTATAAAT GGAATAAGAA AATATTTCAT TGATGGCAGC
GGCGGCTGTG ATATCCCGAA AATCTCCTAT ATGCTGGCAA CAGCGAGAGT GGAGTGCTAC
GACTGGATTA ACGGAGTTTT CTTTGGCCCA AGAGCTGAAG GAATCAGCTA CGAGAAGGCG
GAAATTGACT ACGGAGTTGG CCAAACTGCC AGACGAGCGG ATTACGCACG AAAAATGGGT
AATGCTGCTG ACGGCGACGG CTTTAAGTAC CGTGGCCGCG GCCTCGTGCA AATCACATGG
AAAGGAAAAT ATTCAACATT TGAAAGCCTG CTAAACGTCC CTCTCGTTGA TCACCCAGAA
ATGGCGTGCG AATGGGATGT AGCATTAAGA ATTATGGTTA TAGGCATGAC GCAAGGAACA
TTCACTGGAT CCTCATTAAA GGATTTCATA AATGAGTCAA CAACAAATTA TCATGATGCC
CGGCAAATAA TTAATGGATT TGACAAGGCA GACATCATTG CCGGATACGC CAAGAAATTC
GAGGAAATCC TGAAGGAATC AAAATCATGA
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| Protein sequence | MTDKHPPKQP PKKPEPDAKP AYTPLAWSYP FSPATKEGAT PDTTDPMTYM KVLATAEDGF
YPLGASGIWH GGIHFGQKTG EALKQDDGVR AIATGEVVAY RLDSEYPTLT YQDQRHALYS
RGFVLIRHTL QLPPAPKKTE PAPAPANAPA GSPPSGGNAT PPAPAPTPAP ASSGPPPGET
LTFFSLYMHT LDWKTYKAAL DQPKTANADP KAPQLKPAPY WEVDRSYRAL KPNKQDLPKR
KPIDPGALGD DSSPQQQGPD DVLPEPVAGV RVRIIPNGKL LGLLPEGTEL TVNEADNGGR
KGWAKITKII KGDPVGPVVG QSPDVQLKWG YVFVSELAPI PQSGPVDKVV VLKKPYPVKA
GDVVAHIGQY QRYREAKPTP PLPTRPLLHL EIFAGPDLPA FITKSQARAQ ELPETDKPFL
EILKGAKLVT KAPDPDYTLE QTGLKLVPVS DPKSRWVKVQ PKTVKMPAEQ PEPPAPAGKG
KHKPKPAKKP EPIETSTGSP FWVDSSLGLI NQMTTAPVKG WKDFPLKVSQ AEGPGTDFSN
VLRIIDLDKE GPQSLAREDK DASGKAKRWW NVTVGTKDGG TRQGWVREQD HPKVKLCSPW
DWPGFELVDN SSTTMVDMFK RYLFVAGLAM GEDQDNFKPS ADALATSDLI QKLEQAIDVN
HDGKVTAAEL ADAQKTKWLA EAISHMVVKS ESEWGGNMGK WEDILPHMKL VPWKWQNEMD
RIKKLQWWEE VQSIDAKILP KEPKPWHFHP IGLIGNFKQS CNCIDTDKFI EEYKKQHSED
FGWYDNPGSK KSTLKPLNSE SEQNLRQLIN GIRKYFIDGS GGCDIPKISY MLATARVECY
DWINGVFFGP RAEGISYEKA EIDYGVGQTA RRADYARKMG NAADGDGFKY RGRGLVQITW
KGKYSTFESL LNVPLVDHPE MACEWDVALR IMVIGMTQGT FTGSSLKDFI NESTTNYHDA
RQIINGFDKA DIIAGYAKKF EEILKESKS
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