| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2220 |
|---|
| Symbol | |
|---|
| ID | 4311443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 2447031 |
|---|
| End bp | 2448392 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638150047 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_774110 |
|---|
| Protein GI | 115352271 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.896585 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACCTCAC CCGCCCTGCC CGGCCGCGAC CCGCTCGCGT CCGCCGTTTC GAAAGTGAAG
TGGCACGTGC TGCCGCTCGT GCTGATCATG TTCATCGCGA ACTACATCGA CCGCGTGAAC
GTCGGCTTCG TCGACCGCCA CCTCGAAGCG TCGATCGGAA TCGGCGCGGC CGCTTACGGG
CTCGGCGCCG GCCTGTTCTT CGTCGGCTAC GCGCTGTTCG AAGTGCCGTC GAACCTGCTG
ATGCAGCGCT ACGGCGCACG CATCTGGCTT GCGCGGATCA TGGCGACGTG GGGCGTCGTC
GCGGCCGCGA TGGCGTTCGT GTGGAACGAC ACGTCGTTCT ATGCGCTGCG CTTCCTGCTC
GGCGCGGCCG AGGCCGGCTT CTTCCCCGGC GTCGTGCTGT ACCTGTCGCA ATGGCTGCCG
CCGCAGGAAC GCGGCAAGGC GATGGCGATC TTCCTCGGCG GTTCCGCGTT CGCTTCGATC
CTGTCCGGGC CCGTCACCGG CGCGCTGCTG TCGATCCACG GCTTCGGCCT GCAGGGCTGG
CAGTGGATGT TCCTGATCGA AGGGATGTTC TCGGTCGCGC TGTGCGGCGC GAGCTGGCTG
CTGCTGAAAT CGCACATCCG CGACGCGACG TGGCTCACCG CCGACGAACG CGCGGCACTC
CAGAACGCCC TCGATGAAGA GCGCGCGACC CGCGACGTGC GCTCGAAGGT GCACGTGTCG
GCCACCACGC TGCTGCGCGA CCCGCAGATC ATGCTGTTCT GCTTCCTGTA TTTCGCGATC
CAGCTGACGA TCTACGCGGC CACCTTCTGG CTGCCGACGA TCATCCGCAA GATGGGCGGC
CTCACCGACT TCCAGGTCGG CCTCTACAAC ACGATTCCGT GGATGATCGC GATCGGCGCG
ATGTACGGCT TCGCGGTGCT CTCCGCGAAG TGGAAGCATC CGCAGCGCTG GCTGTCGTTC
GCGCTGGTGC TGGCCGCGTG CGGGCTGTTC GCGTCGACGT CGCACGATCC CGTCTGGTCG
TTCGCGTCGA TCTGCTTCGC CGCGCTCGGC TTCAAGGCCG CGTCGTCGTT GTTCTGGCCG
ATCCCGCAGG GCTACCTCGA CACGCGCGTG GCCGCGGCCG TGATCGCACT GATCAACTCG
ATCGGCAACC TTGGCGGCTT CGTCGCGCCG ACGGCATTCG GCTATCTGAA GCAACATACG
GGTTCGATCA CGGGCGGCCT GTATGCGCTC GCGATCGCGT CCCTCGTCGC GGCGGTCGCC
GCGCTGTTCG CGCGCACGCA CCGGCGCAGC GATCCGCCGC GCGGCCTGCC GGCCGACGAG
TCCTTCACGA ACACCGCGAT GCTCCGCCAT GCCGAACACT GA
|
|---|
| Protein sequence | MTSPALPGRD PLASAVSKVK WHVLPLVLIM FIANYIDRVN VGFVDRHLEA SIGIGAAAYG
LGAGLFFVGY ALFEVPSNLL MQRYGARIWL ARIMATWGVV AAAMAFVWND TSFYALRFLL
GAAEAGFFPG VVLYLSQWLP PQERGKAMAI FLGGSAFASI LSGPVTGALL SIHGFGLQGW
QWMFLIEGMF SVALCGASWL LLKSHIRDAT WLTADERAAL QNALDEERAT RDVRSKVHVS
ATTLLRDPQI MLFCFLYFAI QLTIYAATFW LPTIIRKMGG LTDFQVGLYN TIPWMIAIGA
MYGFAVLSAK WKHPQRWLSF ALVLAACGLF ASTSHDPVWS FASICFAALG FKAASSLFWP
IPQGYLDTRV AAAVIALINS IGNLGGFVAP TAFGYLKQHT GSITGGLYAL AIASLVAAVA
ALFARTHRRS DPPRGLPADE SFTNTAMLRH AEH
|
|---|
| |