Gene Bamb_2211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2211 
Symbol 
ID4310117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2435938 
End bp2437461 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content69% 
IMG OID638150038 
Producthistidine ammonia-lyase 
Protein accessionYP_774101 
Protein GI115352262 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2986] Histidine ammonia-lyase 
TIGRFAM ID[TIGR01225] histidine ammonia-lyase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACGT TGACCCCCGG CCACCTGACC CTCCCGCAAC TGCGCAAGAT CGCTCGCGAA 
TCCGTGCAGC TCACGCTCGA CCCGGCGAGC TTCGCGAAGA TCGACGCCGG CGCGAAGGCC
GTCGCCGACA TCGCGGCGAA AGGCGAGCCG GCGTACGGCA TCAACACGGG CTTCGGCCGC
CTGGCCAGCA CGCACATCCC GCACGACCAG CTCGAGCTGC TGCAGAAGAA CCTGGTGCTG
TCGCACGCGG TCGGCGTGGG CGAGCCGATG GCGCGCTCGT CGGTGCGCCT GCTGATGGCG
CTGAAGCTGT CGAGCCTCGG GCGCGGCCAC TCGGGCATCC GCCGCGAGGT GATGGACGCG
CTGATCACGT TGTTCAACGC CGACGTGCTG CCGCTGATCC CGGTGAAGGG CTCGGTCGGC
GCATCGGGCG ACCTCGCGCC GCTCGCGCAC ATGTCGGCCG TGCTGCTCGG CGTCGGTGAA
GTGTTCATCC GCGGCGAGCG CGCGAGCGCG CTGGACGGTC TGCGCGTCGC GGGCCTCGCG
CCGCTCACGC TGCAGGCGAA GGAAGGCCTC GCGCTGCTGA ATGGCACGCA GGCCTCGACG
GCGCTGGCGC TCGACAACAT GTTCTCGATC GAAGACCTGT ACCGCACCGC GCTCGTCGCG
GGTGCGCTGT CGGTCGACGC GGCGGCCGGC TCGGTGAAGC CGTTCGACGC ACGCATCCAC
GAGCTGCGCG GCCATCGCGG CCAGATCGAC GCGGCCGCGG CGTACCGCGA CCTGCTCGAC
GGCTCGCCGA TCAACCAGTC GCACCGCGAC TGCGACAAGG TGCAGGATCC GTACAGCCTG
CGCTGCCAGC CGCAGGTGAT GGGCGCGTGC CTGGACCAGA TGCGCCACGC GGCCGACGTG
CTGCTGATCG AAGCGAACGC CGTGTCGGAC AACCCGCTGA TCTTCCCGGA TACCGGCGAA
GTGCTGTCGG GCGGCAACTT CCACGCTGAA CCCGTCGCGT TCGCGGCCGA CAACCTCGCG
CTCGCCGCCG CCGAAATCGG CGCGCTGGCG GAGCGCCGCA TCGCGCTGCT GATCGACGCG
ACGCTGTCGG GCCTGCCCCC GTTCCTCGTG AAGGACGGCG GCGTGAACTC GGGCTTCATG
ATCGCCCACG TGACGGCTGC CGCGCTGGCC TCGGAAAACA AGACGCTCGC GCACCCGGCA
TCGGTCGACT CGCTGCCGAC CTCGGCGAAC CAGGAAGACC ACGTGTCGAT GGCGACGTTC
GCCGCGCGCA AGCTCGCCGA CATCGCGGAC AACACGAAGT ACATCCTCGC GATCGAACTG
CTGGCCGCCG CGCAGGGCGT CGACCTGCGC GCGCCGTACC ACACGAGCCC GAAGCTCGCG
CCCGTGATGG AAACGATCCG CGGCCATGTT GCGCACTACG AGCTCGACCA CTACTTCGCA
CCGGATATCG CGGTGATCGC GAAGCTCGTC AGCGAGCGCG CGTTCGCGAA GGTCGCGCCG
TTCTCGTTCG CGTCGGAACA GTAA
 
Protein sequence
MITLTPGHLT LPQLRKIARE SVQLTLDPAS FAKIDAGAKA VADIAAKGEP AYGINTGFGR 
LASTHIPHDQ LELLQKNLVL SHAVGVGEPM ARSSVRLLMA LKLSSLGRGH SGIRREVMDA
LITLFNADVL PLIPVKGSVG ASGDLAPLAH MSAVLLGVGE VFIRGERASA LDGLRVAGLA
PLTLQAKEGL ALLNGTQAST ALALDNMFSI EDLYRTALVA GALSVDAAAG SVKPFDARIH
ELRGHRGQID AAAAYRDLLD GSPINQSHRD CDKVQDPYSL RCQPQVMGAC LDQMRHAADV
LLIEANAVSD NPLIFPDTGE VLSGGNFHAE PVAFAADNLA LAAAEIGALA ERRIALLIDA
TLSGLPPFLV KDGGVNSGFM IAHVTAAALA SENKTLAHPA SVDSLPTSAN QEDHVSMATF
AARKLADIAD NTKYILAIEL LAAAQGVDLR APYHTSPKLA PVMETIRGHV AHYELDHYFA
PDIAVIAKLV SERAFAKVAP FSFASEQ