Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2211 |
Symbol | |
ID | 4310117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 2435938 |
End bp | 2437461 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638150038 |
Product | histidine ammonia-lyase |
Protein accession | YP_774101 |
Protein GI | 115352262 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTACGT TGACCCCCGG CCACCTGACC CTCCCGCAAC TGCGCAAGAT CGCTCGCGAA TCCGTGCAGC TCACGCTCGA CCCGGCGAGC TTCGCGAAGA TCGACGCCGG CGCGAAGGCC GTCGCCGACA TCGCGGCGAA AGGCGAGCCG GCGTACGGCA TCAACACGGG CTTCGGCCGC CTGGCCAGCA CGCACATCCC GCACGACCAG CTCGAGCTGC TGCAGAAGAA CCTGGTGCTG TCGCACGCGG TCGGCGTGGG CGAGCCGATG GCGCGCTCGT CGGTGCGCCT GCTGATGGCG CTGAAGCTGT CGAGCCTCGG GCGCGGCCAC TCGGGCATCC GCCGCGAGGT GATGGACGCG CTGATCACGT TGTTCAACGC CGACGTGCTG CCGCTGATCC CGGTGAAGGG CTCGGTCGGC GCATCGGGCG ACCTCGCGCC GCTCGCGCAC ATGTCGGCCG TGCTGCTCGG CGTCGGTGAA GTGTTCATCC GCGGCGAGCG CGCGAGCGCG CTGGACGGTC TGCGCGTCGC GGGCCTCGCG CCGCTCACGC TGCAGGCGAA GGAAGGCCTC GCGCTGCTGA ATGGCACGCA GGCCTCGACG GCGCTGGCGC TCGACAACAT GTTCTCGATC GAAGACCTGT ACCGCACCGC GCTCGTCGCG GGTGCGCTGT CGGTCGACGC GGCGGCCGGC TCGGTGAAGC CGTTCGACGC ACGCATCCAC GAGCTGCGCG GCCATCGCGG CCAGATCGAC GCGGCCGCGG CGTACCGCGA CCTGCTCGAC GGCTCGCCGA TCAACCAGTC GCACCGCGAC TGCGACAAGG TGCAGGATCC GTACAGCCTG CGCTGCCAGC CGCAGGTGAT GGGCGCGTGC CTGGACCAGA TGCGCCACGC GGCCGACGTG CTGCTGATCG AAGCGAACGC CGTGTCGGAC AACCCGCTGA TCTTCCCGGA TACCGGCGAA GTGCTGTCGG GCGGCAACTT CCACGCTGAA CCCGTCGCGT TCGCGGCCGA CAACCTCGCG CTCGCCGCCG CCGAAATCGG CGCGCTGGCG GAGCGCCGCA TCGCGCTGCT GATCGACGCG ACGCTGTCGG GCCTGCCCCC GTTCCTCGTG AAGGACGGCG GCGTGAACTC GGGCTTCATG ATCGCCCACG TGACGGCTGC CGCGCTGGCC TCGGAAAACA AGACGCTCGC GCACCCGGCA TCGGTCGACT CGCTGCCGAC CTCGGCGAAC CAGGAAGACC ACGTGTCGAT GGCGACGTTC GCCGCGCGCA AGCTCGCCGA CATCGCGGAC AACACGAAGT ACATCCTCGC GATCGAACTG CTGGCCGCCG CGCAGGGCGT CGACCTGCGC GCGCCGTACC ACACGAGCCC GAAGCTCGCG CCCGTGATGG AAACGATCCG CGGCCATGTT GCGCACTACG AGCTCGACCA CTACTTCGCA CCGGATATCG CGGTGATCGC GAAGCTCGTC AGCGAGCGCG CGTTCGCGAA GGTCGCGCCG TTCTCGTTCG CGTCGGAACA GTAA
|
Protein sequence | MITLTPGHLT LPQLRKIARE SVQLTLDPAS FAKIDAGAKA VADIAAKGEP AYGINTGFGR LASTHIPHDQ LELLQKNLVL SHAVGVGEPM ARSSVRLLMA LKLSSLGRGH SGIRREVMDA LITLFNADVL PLIPVKGSVG ASGDLAPLAH MSAVLLGVGE VFIRGERASA LDGLRVAGLA PLTLQAKEGL ALLNGTQAST ALALDNMFSI EDLYRTALVA GALSVDAAAG SVKPFDARIH ELRGHRGQID AAAAYRDLLD GSPINQSHRD CDKVQDPYSL RCQPQVMGAC LDQMRHAADV LLIEANAVSD NPLIFPDTGE VLSGGNFHAE PVAFAADNLA LAAAEIGALA ERRIALLIDA TLSGLPPFLV KDGGVNSGFM IAHVTAAALA SENKTLAHPA SVDSLPTSAN QEDHVSMATF AARKLADIAD NTKYILAIEL LAAAQGVDLR APYHTSPKLA PVMETIRGHV AHYELDHYFA PDIAVIAKLV SERAFAKVAP FSFASEQ
|
| |