| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2210 |
|---|
| Symbol | |
|---|
| ID | 4310116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 2435238 |
|---|
| End bp | 2435933 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638150037 |
|---|
| Product | histidine utilization repressor |
|---|
| Protein accession | YP_774100 |
|---|
| Protein GI | 115352261 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR02018] histidine utilization repressor, proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGC CGGTCTACCA GGAGATCAAG GATTTCATCC TGGGCCGCAT TCACGCCGGC
GAGTGGGCGG AGGGCGACCA GGTGCCCTCC GAGAACGAAC TGGCCCGCGA ATTCAAGGTC
GCGCGCATGA CCGTCAACCG CGCGTTGCGC GAGTTGACGG CCGAGCAGGT GCTCACCCGC
ATGAAGGGCG CGGGAACCTA CGTCGCGCGG CCGAAGTACG AGTCGACGCT CGTCGCGATC
CGCAGCATTT CGGAAGAGGT CGACGCGCGC GGGCATGCGT ACCGCGCGAG CGTGCTCGGC
CTCGACACGA TCCGCGCCGA CGAGGCGCTC GCCGACGAGA TGCAGATGGC CGTGCGCGCA
ACGCTGTTTT ATTCGCAGGT GTTGCACTTC GAGAATGACG AACCCGTCCA GCTCGAAGAA
CGATGGGTGA ATCCGGCGGT CGCGCCGGAT TATGCCGAGC AGGATTTCAC GAACACGACG
CCGAACCTGT ACTTGATGCG CGCGGCCCCG CTGCAGCGCG TCGAGTATCG GATCGAAGCG
GCGGCTCCGG CGCCCGAGCG GCGCGAGCAG TTGCGGATGG ACGACGTCGA GCCGTGTCTG
GTTTTACATC GGCGTACCTG GTCGCAGGGC GTCGTCGCCT CGGTGGCGAA CTTGTGGCAC
CCGGGCAGTC GTTATCGCTT CACCGGGCAT TTCTGA
|
|---|
| Protein sequence | MSAPVYQEIK DFILGRIHAG EWAEGDQVPS ENELAREFKV ARMTVNRALR ELTAEQVLTR
MKGAGTYVAR PKYESTLVAI RSISEEVDAR GHAYRASVLG LDTIRADEAL ADEMQMAVRA
TLFYSQVLHF ENDEPVQLEE RWVNPAVAPD YAEQDFTNTT PNLYLMRAAP LQRVEYRIEA
AAPAPERREQ LRMDDVEPCL VLHRRTWSQG VVASVANLWH PGSRYRFTGH F
|
|---|
| |