| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2198 |
|---|
| Symbol | |
|---|
| ID | 4310104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 2423589 |
|---|
| End bp | 2424491 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638150024 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_774088 |
|---|
| Protein GI | 115352249 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTGC GGCAGTTGCG CTACTTCGTG GCGGTCGCCG AGGAACTGCA TTTCGGGCGC
GCGGCGAAGC GCCTGTTCAT CTCGCAGCCG GCGCTGAGCT TCGACATCCG CAAGTTCGAG
GAAGCGCTCG GCGTGCAGCT CTTTTCACGC ACCAACAAGA CAGTGGCGCT GACCAACGCG
GGCGCGGTGC TGCTCGGCGA AGCGCGCCGG CTGCTGCTGC AGGCGAGCGA GGCCGAGCGT
CTCACGGTGC GCTCGGCGTC CGGTCTCGCG GGTCGCCTGC GGATCGGCTT CGTCCATTCG
ATGCTGTATC GCGGGCTGCC CGATGCGGTG CAGCGCTTCG AGGCCGACTA TCCGGGCGTG
GAAATCGTGC TGAGCGAGAT GAACACGCAC GCGCAGGTGC AGGCGGTCCA GCGCGGCCAG
ATCGATCTCG GTTACGCGCA CTGGGGCCAC TGCCCGCCCG AGGTCGAATC GACGCCCGTC
TACACGGAAC CGTTCGTGTG CTGCCTGCCG GCCGCGCATC CGCTCGCGCG GCGGCGGCAG
GTCGCGCTCG CCGCGCTGGC CGCGGAACCG TTCATCCTGT TTCCGCGCGA CGCGGCGCCG
CACTATCACG ACCTGATCAT CGCGCAATGC GTGAACGCGG GATTCAGCCC GCTGATCCGT
CACGAGGCGC GGCTGTGGCA GACGATCCTG TCGATGATCG AGTTCGGGAT GGGCATCGCG
CTGGTGCCGC GCGTGCTGCA GCAGGTGAAG AGCGACCGGC TCGCGTTCCG GCCGCTGAAG
GATGCGTCGC TCGAATCGCG CACGCTGGAA CTGAAGCGCA GCGGCACCGC CGAACCGGTC
GCGCTGCGCT TCGCCGACTA CGTGCGCGCG TCGATCGACG CGCTGCCGGC GCTCGCGGGC
TGA
|
|---|
| Protein sequence | MELRQLRYFV AVAEELHFGR AAKRLFISQP ALSFDIRKFE EALGVQLFSR TNKTVALTNA
GAVLLGEARR LLLQASEAER LTVRSASGLA GRLRIGFVHS MLYRGLPDAV QRFEADYPGV
EIVLSEMNTH AQVQAVQRGQ IDLGYAHWGH CPPEVESTPV YTEPFVCCLP AAHPLARRRQ
VALAALAAEP FILFPRDAAP HYHDLIIAQC VNAGFSPLIR HEARLWQTIL SMIEFGMGIA
LVPRVLQQVK SDRLAFRPLK DASLESRTLE LKRSGTAEPV ALRFADYVRA SIDALPALAG
|
|---|
| |