Gene Bamb_2182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2182 
Symbol 
ID4310088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2400486 
End bp2401301 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content66% 
IMG OID638150008 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_774072 
Protein GI115352233 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGCCT TCGCATTCAC CCCGCACGCA TTCCCGTTCA TGAAAATCGC CACCTGGAAC 
GTCAACTCGC TCAACGTCCG CAAGCAGCAC GTGCTCGACT GGATCGCGCA CAGCGGAACC
GACGTGCTGT GCCTGCAGGA ACTGAAGCTG CCGGATGAGA AGTATCCGCG CGCCGATCTC
GAGGCCATCG GCTACCGCAG CTGGTTCACC GGCCAGCGGA CCTACAACGG CGTCGCGATC
CTCGCGCGCG ACACGCTCGC CGTCGACGAA TCGGACATCG TGCGCAACAT CCCCGGCTTC
GACGATCCGC AGCAGCGCGT GATCGCCGTG ACGGTCGAAG GCGTGCGGAT CGTGTCCGCC
TATTTCCCGA ACGGCCAGTC GCCCGAGTCC GACAAGTTCG TCTACAAGAT GCAGTGGCTC
GACGCACTGC ATGCGTGGCT GAGCGCCGAG ATGCAGCGCT ATCCGAAGCT CGCGCTGCTC
GGCGACTACA ACATCGCGCC GGAAGACCGC GACGTGCACG ATCCCGCGAA ATGGGAAGGC
CAGAACCTCG TGTCGCCGCA GGAGCGCGCG CACTTCGCGA AGCTGCTCGA GCTCGGCTTC
GTCGACGCGT TCCGCCGTTT CGAGCAGCCC GAGAAGACCT TCACGTGGTG GGACTACCGG
ATGCTCGCGT TCCGCCGCAA CGCGGGGCTG CGCATCGATC ACATCCTGCT GTCGCCGGCG
CTCGCCGCCA ACTGCACGTC GTGCGAAGTC GACCGCCTGC CGCGCACGTG GGAACAGCCG
TCCGACCACA CGCCCGTCGT CGCGGTCGTC TGCTGA
 
Protein sequence
MAAFAFTPHA FPFMKIATWN VNSLNVRKQH VLDWIAHSGT DVLCLQELKL PDEKYPRADL 
EAIGYRSWFT GQRTYNGVAI LARDTLAVDE SDIVRNIPGF DDPQQRVIAV TVEGVRIVSA
YFPNGQSPES DKFVYKMQWL DALHAWLSAE MQRYPKLALL GDYNIAPEDR DVHDPAKWEG
QNLVSPQERA HFAKLLELGF VDAFRRFEQP EKTFTWWDYR MLAFRRNAGL RIDHILLSPA
LAANCTSCEV DRLPRTWEQP SDHTPVVAVV C