| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2173 |
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| Symbol | |
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| ID | 4311038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 2385640 |
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| End bp | 2387295 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638149998 |
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| Product | dihydrolipoamide acetyltransferase |
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| Protein accession | YP_774063 |
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| Protein GI | 115352224 |
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| COG category | [C] Energy production and conversion
[I] Lipid transport and metabolism |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG0511] Biotin carboxyl carrier protein |
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| TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.978477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAAG CGATCGAAGT GAAGGTGCCG GATATCGGCG ATTACAAGGA CGTGCCCGTC
ATCGAGGTGC TGGTGAAGGC GGGTGACACG GTCGAGCCCG AGCAGTCGCT CGTCACGCTC
GAGTCGGACA AGGCGACGAT GGACGTGCCG AGCCCGGCTG GCGGCACGGT CAAGGAAGTG
AAGGTCAAGG TGGGCGATTC CGTGTCGGAA GGCTCGCTGA TCATCCTGCT CGAAGGCGGC
GCCGCGGCGC AGGTGAACGG CGCGGCAGCG CCGGCGGCGG CCCCGGCTCC GGCGGCAGCC
CCGGCACCGG CAGCACCGGC CGCAGCGGCA CCGGCCGCCG CGCCGGCAGC GTCGGGCGGC
ACGCTCGAGG TGAAGGTACC CGACATCGGC GACTACAAGG ATGTCCCGGT GATCGAGATC
GGCGTGAAGG TCGGCGACAC GGTCGAGAAG GAGCAGTCGC TCGTCACGCT CGAGTCGGAC
AAGGCGACGA TGGACGTGCC GAGCCCGGCC GCCGGCGTCG TGAAGGAAAT CAAGGTCAAG
GTGGGCGATT CGGTGTCGGA AGGCACGCTG ATCGTGCTGC TCGACGCCGC CGGCGCACCG
GCTGCCGCCG CGCCGCAGGC GAGCGCACCG GCTCCGGCTC CGGCCGCGCC GGCACCTGCC
GCAGCACCGG CACCCGCGAA GGCCGCGCCG GCACCGGCCG CAGCTGCACC GGCCGCCGCA
CCGTCGGGCG AGTATCGTGC AAGCCACGCG TCGCCGTCGG TGCGCAAGTT CGCGCGCGAA
CTCGGCGTCG AAGTCGCACG CGTGCAGGGT AGCGGTCCGA AGGGCCGCAT CACCAAGGAA
GACATCACGG GCTTCGTGAA GGGCGTGATG ACGGGCCAGC GCGCGGCACC GGCTGCTGCA
GCCGCGCCGG CAGGCGGCGG CGAGCTGAAC CTGCTGCCGT GGCCGAAGGT CGACTTCTCG
AAGTTCGGCC CGTTCGAAGC GAAGCCGCTG TCGCGCATCA AGAAGATCTC CGGCGCGAAC
CTGCATCGCA ACTGGGTGAT GATCCCGCAC GTCACGAACA ACGACGAAGC GGACATCACC
GAGCTCGAAG CGCTGCGCGT CCAGCTGAAC AAGGAGCACG AGAAGGCGGG CGTGAAGTTC
ACGATGCTCG CGTTCGTGAT CAAGGCGGTC GTCGCCGCGC TGAAGAAGTT CCCGACCTTC
AACGCGAGCC TCGACGGCGA CAACCTGGTG TTCAAGCAGT ACTACCACGT CGGTTTCGCT
GCCGATACGC CGAACGGCCT CGTCGTGCCG GTGATCCGCG ATGCGGACAA GAAGGGCCTC
GTCGACATCG CGAAGGAAAT GGCCGAGCTG TCGAAGGCCG CGCGCGACGG CAAGCTGAAG
CCGGACCAGA TGCAAGGCGG CTGCTTCTCG ATCTCGTCGC TCGGCGGGAT CGGCGGCACC
AACTTCACGC CGATCATCAA CGCGCCGGAA GTCGCGATCC TCGGCTTGTC GCGCGGGCAG
ATGAAGCCGG TGTGGGACGG CAAGCAGTTC GTGCCGCGTC TGACGCTGCC GCTGTCGCTG
TCGTATGACC ATCGCGTGAT CGATGGCGCG GAAGCCGCGC GGTTCAATGC GTATCTCGGA
GCGTTGCTCG GGGATTTCCG TCGCATCATT CTTTGA
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| Protein sequence | MSQAIEVKVP DIGDYKDVPV IEVLVKAGDT VEPEQSLVTL ESDKATMDVP SPAGGTVKEV
KVKVGDSVSE GSLIILLEGG AAAQVNGAAA PAAAPAPAAA PAPAAPAAAA PAAAPAASGG
TLEVKVPDIG DYKDVPVIEI GVKVGDTVEK EQSLVTLESD KATMDVPSPA AGVVKEIKVK
VGDSVSEGTL IVLLDAAGAP AAAAPQASAP APAPAAPAPA AAPAPAKAAP APAAAAPAAA
PSGEYRASHA SPSVRKFARE LGVEVARVQG SGPKGRITKE DITGFVKGVM TGQRAAPAAA
AAPAGGGELN LLPWPKVDFS KFGPFEAKPL SRIKKISGAN LHRNWVMIPH VTNNDEADIT
ELEALRVQLN KEHEKAGVKF TMLAFVIKAV VAALKKFPTF NASLDGDNLV FKQYYHVGFA
ADTPNGLVVP VIRDADKKGL VDIAKEMAEL SKAARDGKLK PDQMQGGCFS ISSLGGIGGT
NFTPIINAPE VAILGLSRGQ MKPVWDGKQF VPRLTLPLSL SYDHRVIDGA EAARFNAYLG
ALLGDFRRII L
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