| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2172 |
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| Symbol | |
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| ID | 4311037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 2383603 |
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| End bp | 2385369 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638149997 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_774062 |
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| Protein GI | 115352223 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCTCA TCGAAGTCAA AGTTCCGGAT ATCGGCGATT TCAGCGGCGT CGATGTCATC
GAAGTCAACG TGAAACCCGG CGACGTGATC GAAAAAGAGC AAACGCTCAT CACGCTCGAA
TCCGATAAAG CCTCCATGGA AGTGCCCAGC GACGTCGCCG GCACCGTCAA GGAAGTCAAG
GTCAAAGCCG GCGAGAAAGT CTCGCAAGGC ACCATCATCG CCATCGTCGA AGCAGCAGCA
ACCGACGCCG CACCCGTGAA AGCTCCGGAA CCGGCCAAGC CGGCAGCCGC TGCGCCGGCA
CCGGCCGCAG CCGCTCCCGC AGCCGCGCCG CAAGCCGGCA GCTACAGCGG CACCGCCGAC
ATCGAGTGCG ACATGCTCGT GCTCGGCGCC GGCCCCGGCG GCTATTCGGC CGCGTTCCGC
TCGGCCGACC TCGGCATGAA GACGGTGCTG GTCGAACGCT ATTCGACGCT CGGCGGCGTG
TGCCTGAACG TCGGTTGCAT CCCGTCGAAG GCACTGCTGC ACACGGCGCT CGTCATCGAC
GAAGCCGCGG CGCTCGCGTC GCACGGCATC ACGTTCGGCA AGCCGGAAGT CGATCTCGAC
AAGCTGCGCG ACTTCAAGGG CGGCGTCGTC AAGAAACTGA CGACGGGCCT CGCCGGCATG
GCGAAGGCGC GCAAGGTCGA AGTCGTCACC GGCGTCGGCG CATTCGTCGA TCCGTATCAC
ATGGAAGTGC AGGGCGAAAA CGGCAAGAAG GTCGTCAAGT TCAAGCAGGC AATCATCGCC
GCGGGCTCGC AAGCGGTGAA GCTGCCGTTC ATGCCGGAAG ACCCGCGCGT CGTCGATTCG
ACGGGCGCAC TGGAACTGCG CCAACTGCCG AAGCGGATGC TGGTGATCGG CGGCGGCATC
ATCGGCCTCG AAATGGCCAC GGTGTACGCA ACGCTCGGCG CCGAGATCGA CGTGGTCGAA
ATGATGGACG GCCTGATGAT GGGCGCGGAC CGCGATCTCG TGAAGGTCTG GGAAAAGTAC
AACGCGAAGC GCTTCGGCAA CGTGATGCTG AAGACCAAGA CGGTCGGCGC GGAAGCGAAG
GAAGACGGCA TCTACGTGAA GTTCGAGGGC GAGAAGGCGC CGGCGGAAGC GCAGCGCTAC
GACCTCGTGC TCGTCGCGGT GGGCCGCAGC CCGAACGGCA AGACGATCGG CGCCGACAAG
GCGGGCGTGG CCGTCACCGA CCGCGGCTTC ATCGACGTCG ACAAGCAGAT GCGCACGAAC
GTCCCGCACA TCTTCGCGAT CGGCGACGTC GTCGGCCAGC CGATGCTCGC GCACAAGGCC
GTGCACGAAG GGCACGTCGC AGCGGAAGCC GCGCACGGCG AGAAGGCATA CTTCGACGCG
CTGCAGATCC CGTCGGTGGC CTATACCGAT CCGGAAGTGG CGTGGGCCGG CAAGACGGAA
GACCAGTGCA AGGCCGAAGG CATCAAGTAC GGCAAGGCGG TGTTCCCGTG GGCCGCATCG
GGCCGCGCGA TCGCGAACGG CCGCGACGAA GGCTTCACGA AGCTGATCTT CGACGAGGAA
ACCCATCGCG TGATCGGCGG CGGCATCGTC GGCCTGAACG CGGGCGACCT AATCAGCGAA
GTATGTCTCG CCGTCGAGAT GGGCGCGGAC GCGGAAGACA TCGGCAAGAC GATCCATCCG
CACCCGACGC TCGGCGAATC GATCGGCATG GCCGCCGAAC TGTACGAAGG CGTGTGTACG
GACCTGCCGC CGCAACGCAA GAAGTAA
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| Protein sequence | MSLIEVKVPD IGDFSGVDVI EVNVKPGDVI EKEQTLITLE SDKASMEVPS DVAGTVKEVK
VKAGEKVSQG TIIAIVEAAA TDAAPVKAPE PAKPAAAAPA PAAAAPAAAP QAGSYSGTAD
IECDMLVLGA GPGGYSAAFR SADLGMKTVL VERYSTLGGV CLNVGCIPSK ALLHTALVID
EAAALASHGI TFGKPEVDLD KLRDFKGGVV KKLTTGLAGM AKARKVEVVT GVGAFVDPYH
MEVQGENGKK VVKFKQAIIA AGSQAVKLPF MPEDPRVVDS TGALELRQLP KRMLVIGGGI
IGLEMATVYA TLGAEIDVVE MMDGLMMGAD RDLVKVWEKY NAKRFGNVML KTKTVGAEAK
EDGIYVKFEG EKAPAEAQRY DLVLVAVGRS PNGKTIGADK AGVAVTDRGF IDVDKQMRTN
VPHIFAIGDV VGQPMLAHKA VHEGHVAAEA AHGEKAYFDA LQIPSVAYTD PEVAWAGKTE
DQCKAEGIKY GKAVFPWAAS GRAIANGRDE GFTKLIFDEE THRVIGGGIV GLNAGDLISE
VCLAVEMGAD AEDIGKTIHP HPTLGESIGM AAELYEGVCT DLPPQRKK
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