Gene Bamb_2167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2167 
Symbol 
ID4311032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2377762 
End bp2379174 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content68% 
IMG OID638149992 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_774057 
Protein GI115352218 
COG category[C] Energy production and conversion 
COG ID[COG1139] Uncharacterized conserved protein containing a ferredoxin-like domain 
TIGRFAM ID[TIGR00273] iron-sulfur cluster-binding protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.928776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGTCC AATCGATGCA TTTCAAGGCG CGTGCCGGCC AGAAGCTGGC CGATCAGCGC 
CTGCAGCAGA ACCTGAAGAA GCTGTCGACG AAGTTCGTGT CCGCGCGCGC CGACGCGATG
ACCGCGATCG ACTTCCCGGC GACGCGCGCC GCGCTGAAGG CGCGCCGCAA TCGTGCGCTG
GAGAACCTCG ACGTGTGGCT CGAGGCGTTC GAGCGCGAGG CGACGCGGCG CGGCACCACG
GTGCTGTTCG CGGAAACGAC CGAGGATGCC GCGCGGCTCG TCGCCGACAT CGCGCGGCGC
CACGACGTGA AGAAGGTCAT CAAGACGAAG TCGATGGTGT CCGAGGAAAT GCGCCTGAAC
GCGGTGCTCG CCGAGATGGG CGTGCAGTCG ATCGAGACGG ACCTCGGCGA ATACATCCTG
CAGATCAACG ACAACGAGCC GCCGAGCCAC ATCATTGCGC CCGTCGTGCA CAAGGACAAG
GACGAGATCG CCGACCTGTT CGCGCGCACG CACCACCGCG AGCGGCTGAC CGAGATTCCC
GACATGACGC GCGAGGCGCG CGAGGTGCTG CGCCCGCATT TCCTGTCGGC CGACATGGGC
GTGACGGGCG GCAACTTCGT GATCGCCGAG ACCGGTTCGG TCGCGATCGT CACGAACGAA
GGCAACGAAG GCATGTGCAC GGTGATGCCG CGCGTGCATG TCGCCGTGAC GGGCATCGAG
AAGGTGCTGC CGACGCTCGA GGATCTCGCC ACAGCAATGC GTCTGCTGCC GCGTTCGGCC
ACCGGGCAGA AGACGTCGAA CTACTTCTCC CTGCTCACCG GGCCCCGCGG CCCGGGCGAC
GAGGACGGCC CGGAACACAA CTACGTGGTG CTCGTCGACG GCGGCCGCAC GGGCCTGATC
GGCGGCGAAT TCCAGGAGAT GCTGCGCTGC ATCCGCTGCG GCGCATGCAT GAACCATTGC
CCGGTGTACC AGAAGGTCGG CGGGCACGCG TACGGCTGGG TCTATCCGGG CCCGATGGGG
TCGGTGCTGA CGCCGAGCTA CGTCGGAATC GACCGTGCGC TCGACCTGCC GCAGGCCGCG
ACGCTGTGCG GCGAATGCGA CAGCGTCTGC CCGGTGGGGA TCCCGCTGTC GCACCTGCTG
CGCACGCTGC GCGAGAAACA GGTCGAGCGG CACCTGCGGC CGTGGCGCGA GCGCGCCGGA
CTCGCCGTGT GGGGCTTTTT CGCGCGCCGG CCATTGCTTT ACGCGTTGAC GACCAAGCTC
GCGGTGCGCG TGCTCGAGCG GCTCGGCGGC AGCGGCGGCA TGCTGCGGCG CCTGCCAATG
ATGGGCGGCT GGATGGACAC GCGCGACATG CCGACCCCGA CCGGCCGCAC GTTCCGCGAA
CTGTACGCGG CATCGCAAAG CCACCTCGGC TGA
 
Protein sequence
MQVQSMHFKA RAGQKLADQR LQQNLKKLST KFVSARADAM TAIDFPATRA ALKARRNRAL 
ENLDVWLEAF EREATRRGTT VLFAETTEDA ARLVADIARR HDVKKVIKTK SMVSEEMRLN
AVLAEMGVQS IETDLGEYIL QINDNEPPSH IIAPVVHKDK DEIADLFART HHRERLTEIP
DMTREAREVL RPHFLSADMG VTGGNFVIAE TGSVAIVTNE GNEGMCTVMP RVHVAVTGIE
KVLPTLEDLA TAMRLLPRSA TGQKTSNYFS LLTGPRGPGD EDGPEHNYVV LVDGGRTGLI
GGEFQEMLRC IRCGACMNHC PVYQKVGGHA YGWVYPGPMG SVLTPSYVGI DRALDLPQAA
TLCGECDSVC PVGIPLSHLL RTLREKQVER HLRPWRERAG LAVWGFFARR PLLYALTTKL
AVRVLERLGG SGGMLRRLPM MGGWMDTRDM PTPTGRTFRE LYAASQSHLG