| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2162 |
|---|
| Symbol | |
|---|
| ID | 4311027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 2374393 |
|---|
| End bp | 2374800 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638149987 |
|---|
| Product | scaffold protein |
|---|
| Protein accession | YP_774052 |
|---|
| Protein GI | 115352213 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0822] NifU homolog involved in Fe-S cluster formation |
|---|
| TIGRFAM ID | [TIGR01999] FeS cluster assembly scaffold IscU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.789596 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCATACA GCAACAAGGT TCTGGATCAC TACGAAAACC CGCGTAACGT CGGTTCGTTC
GCGAAGGACG ACGACGCGGT CGGTACGGGC ATGGTCGGCG CGCCGGCCTG CGGCGACGTG
ATGAAGCTGC AGATCCGCGT CAGCGCGGAC GGCGTGATCG AAGACGCGAA GTTCAAGACG
TACGGCTGCG GTTCGGCCAT CGCGTCGAGC TCGCTCGTGA CCGAATGGGT GAAGGGCAAG
ACGCTCGACG AGGCGCTGTC GATCAAGAAC ACGCAGATCG CCGAAGAACT TGCACTGCCG
CCGGTGAAGA TTCACTGCTC GATTCTCGCG GAAGACGCGA TCAAGGCAGC CGTGGCCGAC
TACAAGAAGC GCCACGACAC CACGGAAGGC GATCAGGCAG CAGCCTGA
|
|---|
| Protein sequence | MSYSNKVLDH YENPRNVGSF AKDDDAVGTG MVGAPACGDV MKLQIRVSAD GVIEDAKFKT
YGCGSAIASS SLVTEWVKGK TLDEALSIKN TQIAEELALP PVKIHCSILA EDAIKAAVAD
YKKRHDTTEG DQAAA
|
|---|
| |