Gene Bamb_2160 details

Gene Information

• Locus tag: Bamb_2160
• Symbol: hscB
• ID: 4311025
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: -
• Start bp: 2373382
• End bp: 2373987
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 638149985
• Product: co-chaperone HscB
• Protein accession: YP_774050
• Protein GI: 115352211
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1076] DnaJ-domain-containing proteins 1
• TIGRFAM ID: [TIGR00714] Fe-S protein assembly co-chaperone HscB

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.726593
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGGGCAA GAGGCGGCAC GGGCCGCCTT TTTAATGTGC GGCGTTTGCC GCGCGACGAA 
CCGGAATTGA ACGCGACGAT GGTTTCGCTG AAAGACAGCC ACTTCGATCT GTTTCACCTG 
CCGGCGCAAT TCGCGCTCGA TCAGGCGGCG CTCGACAGCG CGTATCGCAC GGTGCAGACG 
CAGGTGCACC CGGACCGCTT CGCGGCGGCC GGCGATGCGC AAAAACGCAT CGCGATGCAA 
TGGGCGACGC GCGCGAACGA GGCCTACCGC ACGCTGCGCG ATCCGCTGAA GCGTGCGACC 
TATCTGCTGT CGCTGCGCGG CGTCGACATC GGTGCCGAAA ACAACACCGC GATGGAGCCC 
GCGTTCCTGA TGCAGCAGAT GGAGTGGCGC GAAGGCATCG AGGATGCCGC GGCCGCCCGC 
AACGTCGACG CGCTCGATGC GCTGCTCGCC GAACTGCGCG ACGAGAAGCG CGTGCGCCTG 
GAGCGCCTCG GCACGCTGCT CGACAGCGCG GCCGACCAGG CCGCCGCCGA GGCCGTGCGC 
CAGCTGATGT TCATCGAACG CGTCGCGTCG GAAGTGGGCG CGCAGATCGA GCGCCTCGAA 
ACTTAA 

 

Protein sequence

MRARGGTGRL FNVRRLPRDE PELNATMVSL KDSHFDLFHL PAQFALDQAA LDSAYRTVQT 
QVHPDRFAAA GDAQKRIAMQ WATRANEAYR TLRDPLKRAT YLLSLRGVDI GAENNTAMEP 
AFLMQQMEWR EGIEDAAAAR NVDALDALLA ELRDEKRVRL ERLGTLLDSA ADQAAAEAVR 
QLMFIERVAS EVGAQIERLE T